Left reads: Input : 46264487 Mapped : 42294520 (91.4% of input) of these: 1898224 ( 4.5%) have multiple alignments (32883 have >20) Right reads: Input : 46264487 Mapped : 41116214 (88.9% of input) of these: 1847768 ( 4.5%) have multiple alignments (32852 have >20) 90.1% overall read mapping rate. Aligned pairs: 39413337 of these: 1738529 ( 4.4%) have multiple alignments 214188 ( 0.5%) are discordant alignments 84.7% concordant pair alignment rate.