Left reads: Input : 21488758 Mapped : 17561144 (81.7% of input) of these: 850088 ( 4.8%) have multiple alignments (14664 have >20) Right reads: Input : 21488758 Mapped : 18125746 (84.3% of input) of these: 879931 ( 4.9%) have multiple alignments (14667 have >20) 83.0% overall read mapping rate. Aligned pairs: 16139148 of these: 751194 ( 4.7%) have multiple alignments 90606 ( 0.6%) are discordant alignments 74.7% concordant pair alignment rate.