Left reads: Input : 18298009 Mapped : 10758901 (58.8% of input) of these: 985543 ( 9.2%) have multiple alignments (59809 have >20) Right reads: Input : 18298009 Mapped : 10365514 (56.6% of input) of these: 957829 ( 9.2%) have multiple alignments (58955 have >20) 57.7% overall read mapping rate. Aligned pairs: 10106671 of these: 925695 ( 9.2%) have multiple alignments 45851 ( 0.5%) are discordant alignments 55.0% concordant pair alignment rate.