@include "_sc_rna_analyzer_stages.mro"

call RUN_KMEANS(
    matrix_h5 = "/net/waxman-server/mnt/data/waxmanlabvm_home/kkarri/NASH/data/Chow3/Chow_3_run/SC_RNA_COUNTER_CS/SC_RNA_COUNTER/SC_RNA_ANALYZER/PREPROCESS_MATRIX/fork0/join-ue9a9a74d3a/files/preprocessed_matrix_h5.h5",
    pca_h5 = "/net/waxman-server/mnt/data/waxmanlabvm_home/kkarri/NASH/data/Chow3/Chow_3_run/SC_RNA_COUNTER_CS/SC_RNA_COUNTER/SC_RNA_ANALYZER/CHOOSE_DIMENSION_REDUCTION_OUTPUT/fork0/chnk0-ue9a9a74f04/files/pca_h5.h5",
    skip = false,
    random_seed = null,
    max_clusters = null,
    num_bcs = null,
    num_pcs = null,
)