@include "_sc_rna_analyzer_stages.mro"

call RUN_MULTIGENOME_ANALYSIS(
    raw_matrices_h5 = "/net/waxman-server/mnt/data/waxmanlabvm_home/kkarri/G172/10X_TCPO_premRNA_Gene/SC_RNA_COUNTER_CS/SC_RNA_COUNTER/_BASIC_SC_RNA_COUNTER/COUNT_GENES/fork0/join-u6ddfc30d1d/files/matrices_h5.h5",
    filtered_matrices_h5 = "/net/waxman-server/mnt/data/waxmanlabvm_home/kkarri/G172/10X_TCPO_premRNA_Gene/SC_RNA_COUNTER_CS/SC_RNA_COUNTER/_BASIC_SC_RNA_COUNTER/FILTER_BARCODES/fork0/join-u6ddfc31616/files/filtered_matrices_h5.h5",
    is_multi_genome = false,
    skip = false,
)