### STAR   --runMode genomeGenerate   --runThreadN 1   --genomeDir /restricted/projectnb/waxmanlab/kkarri1/ref/mm10Annot_PCG-newlncs_GeneBody_TACOTishaEnsmblNRLincs/star   --genomeFastaFiles /restricted/projectnb/waxmanlab/kkarri1/ref/mm10Annot_PCG-newlncs_GeneBody_TACOTishaEnsmblNRLincs/fasta/genome.fa      --genomeSAindexNbases 14   --genomeChrBinNbits 18   --genomeSAsparseD 3   --limitGenomeGenerateRAM 17179869184   --sjdbGTFfile /restricted/projectnb/waxmanlab/kkarri1/ref/mm10Annot_PCG-newlncs_GeneBody_TACOTishaEnsmblNRLincs/genes/genes.gtf
versionGenome	20201
genomeFastaFiles	/restricted/projectnb/waxmanlab/kkarri1/ref/mm10Annot_PCG-newlncs_GeneBody_TACOTishaEnsmblNRLincs/fasta/genome.fa 
genomeSAindexNbases	14
genomeChrBinNbits	18
genomeSAsparseD	3
sjdbOverhang	100
sjdbFileChrStartEnd	- 
sjdbGTFfile	/restricted/projectnb/waxmanlab/kkarri1/ref/mm10Annot_PCG-newlncs_GeneBody_TACOTishaEnsmblNRLincs/genes/genes.gtf
sjdbGTFchrPrefix	-
sjdbGTFfeatureExon	exon
sjdbGTFtagExonParentTranscript	transcript_id
sjdbGTFtagExonParentGene	gene_id
sjdbInsertSave	Basic