Index of /kkarri/G171/ref/mm10_ensmbl/new_lncRNAs_reference

Icon  Name                                                                            Last modified      Size  Description
[PARENTDIR] Parent Directory                                                                                     -   
[   ] bedToBigBed                                                                     2020-07-21 17:58  5.7M  
[   ] genePredToBed                                                                   2020-07-21 17:59   25M  
[   ] gtfToGenePred                                                                   2020-07-21 18:00   25M  
[   ] PCG_Trans.gtf                                                                   2020-08-03 15:05   35M  
[   ] genome.fa                                                                       2020-08-03 15:41  2.6G  
[   ] genome.fa.fai                                                                   2020-08-03 15:41  5.1K  
[   ] index_lnc_usethis_v1.0.qsub                                                     2020-08-03 15:47  1.2K  
[   ] genes.gtf                                                                       2020-08-03 15:49  6.1M  
[   ] PCG_Genes.gtf                                                                   2020-08-03 15:49  3.4M  
[   ] index_lnc_GENE.qsub                                                             2020-08-03 15:53  1.0K  
[   ] index_lnc_TRANS.qsub                                                            2020-08-03 15:53  1.0K  
[   ] New_liverlncRNAs_mm10_for_snRNAseq.gtf                                          2020-08-03 16:30   15M  
[   ] mm10_PCG-newlncRNA-ERCC-dcas9-mcherry_Gene.gtf                                  2020-08-03 16:30   18M  
[   ] mm10_PCG-newlncRNA-ERCC-dcas9-mcherry_Trans.gtf                                 2020-08-03 16:30   50M  
[DIR] mm10_premrna_PCG-newlncs_GENE/                                                  2020-08-03 16:36    -   
[DIR] mm10_premrna_PCG-newlncs_TRANS/                                                 2020-08-03 16:39    -   
[   ] mm10_PCG-newlncRNA-ERCC-dcas9-mcherry_Gene_GeneBody.gtf                         2020-08-04 13:25   13M  
[   ] New_liverlncRNAs_mm10_for_snRNAseq_GeneBody.gtf                                 2020-08-04 13:32  9.9M  
[DIR] mm10_premrna_PCG-newlncs_GeneBody/                                              2020-08-04 13:37    -   
[   ] GRCh38-1.2.0.premrna.gtf                                                        2020-08-06 16:35   39M  
[   ] non-PCG_Gene.gtf                                                                2020-08-06 16:51  1.4M  
[   ] New_liverlncRNAs_mm10_vs_non-PCG_GeneBody.gtf                                   2020-08-06 16:55  1.6M  
[   ] TACOTisha_RefseqNR_52K_mm10_Annotated_GeneBody_GTF.gtf                          2020-08-08 18:13  8.5M  
[   ] index_lnc_GeneBody_For_NRCombined.qsub                                          2020-08-08 20:09  1.0K  
[   ] Final_TACOTisha-NR-Ensmbl-Non_PCG_57K_GeneBody-mm10Annot_V1.gtf                 2020-08-08 20:31   10M  
[   ] Final_EnsmblPCG_TACOTisha_NR-EnsmblNonPCG_GeneBody.gtf                          2020-08-08 20:37   14M  
[   ] Problematic_NRGenes_Cellranger                                                  2020-08-08 22:46  316   
[   ] Final_EnsmblPCG_TACOTisha_NR-EnsmblNonPCG_GeneBody_Nodups.gtf                   2020-08-08 22:49   14M  
[   ] index_lnc_GeneBody.qsub                                                         2020-08-08 22:52  1.3K  
[DIR] mm10_ensembl_GeneBody_NRCombined/                                               2020-08-08 22:59    -   
[   ] Final_48KTACOTisha_7GOI_Genebody_mm10Annot.gtf                                  2020-08-09 21:37   12M  
[   ] Ensmbl_linc_antisense.gtf                                                       2020-08-10 06:39  778K  
[   ] Final_48KTACOTisha_7GOI_EnsmblLincAntisense_Genebody_mm10Annot.gtf              2020-08-10 06:40   13M  
[DIR] mm10Annot_48KTACOTisha_7GOI_Genebody/                                           2020-08-10 07:48    -   
[   ] index_lnc_GeneBody_For_48KTACOAnnot.qsub                                        2020-08-10 12:22  1.6K  
[DIR] mm10Annot_PCG-newlncs_GeneBody_TACOTishaEnsmblNRLincs/                          2020-08-10 14:33    -   
[DIR] logs/                                                                           2020-08-10 14:39    -   
[   ] Ensmbl_NRlist                                                                   2020-08-14 12:56   89K  
[   ] Ensmble_NR_ExonCollapsed_Final.gtf                                              2020-08-14 13:39  2.2M  
[   ] ERCC                                                                            2020-08-14 14:04   12K  
[   ] PCG.gtf                                                                         2020-08-14 15:54  794M  
[   ] FinalGTF_Ensmbl_48KTACOTisha-7GOI_4795Ensmblnc_mm10_Annotated_ExonCollapsed.gtf 2020-08-14 15:55  809M  
[   ] index_mm10exoncollpased_EnsmblPCG_48KTACO7GOI_Ensmblnc.qsub                     2020-08-14 15:56  1.1K  
[   ] Log.out                                                                         2020-08-14 16:47  829K  
[DIR] mm10_exoncollapsed_EnsmblPCG-TACOlncs_Ensmblnc/                                 2020-09-01 05:28    -   
[DIR] bed_to_gtf/                                                                     2021-11-10 19:02    -   
[DIR] NewRefseqGTF/                                                                   2022-10-21 11:37    -