6697933 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 6697933 + 0 mapped (100.00%:-nan%) 6697933 + 0 paired in sequencing 3415283 + 0 read1 3282650 + 0 read2 2598854 + 0 properly paired (38.80%:-nan%) 6213126 + 0 with itself and mate mapped 484807 + 0 singletons (7.24%:-nan%) 3447862 + 0 with mate mapped to a different chr 0 + 0 with mate mapped to a different chr (mapQ>=5)