49497878 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 49497878 + 0 mapped (100.00%:-nan%) 49497878 + 0 paired in sequencing 24494094 + 0 read1 25003784 + 0 read2 39948680 + 0 properly paired (80.71%:-nan%) 42277932 + 0 with itself and mate mapped 7219946 + 0 singletons (14.59%:-nan%) 1109040 + 0 with mate mapped to a different chr 52480 + 0 with mate mapped to a different chr (mapQ>=5)