49411620 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 49411620 + 0 mapped (100.00%:-nan%) 49411620 + 0 paired in sequencing 25159743 + 0 read1 24251877 + 0 read2 42224092 + 0 properly paired (85.45%:-nan%) 45992372 + 0 with itself and mate mapped 3419248 + 0 singletons (6.92%:-nan%) 1244226 + 0 with mate mapped to a different chr 89264 + 0 with mate mapped to a different chr (mapQ>=5)