Left reads: Input : 29120821 Mapped : 22239956 (76.4% of input) of these: 664236 ( 3.0%) have multiple alignments (68077 have >20) Right reads: Input : 29120821 Mapped : 21397570 (73.5% of input) of these: 658129 ( 3.1%) have multiple alignments (68079 have >20) 74.9% overall read mapping rate. Aligned pairs: 20683422 of these: 561632 ( 2.7%) have multiple alignments 95698 ( 0.5%) are discordant alignments 70.7% concordant pair alignment rate.