45089118 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 45089118 + 0 mapped (100.00%:-nan%) 45089118 + 0 paired in sequencing 22937612 + 0 read1 22151506 + 0 read2 40072856 + 0 properly paired (88.87%:-nan%) 42337974 + 0 with itself and mate mapped 2751144 + 0 singletons (6.10%:-nan%) 200438 + 0 with mate mapped to a different chr 84058 + 0 with mate mapped to a different chr (mapQ>=5)