42998564 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 42998564 + 0 mapped (100.00%:-nan%) 42998564 + 0 paired in sequencing 21904757 + 0 read1 21093807 + 0 read2 38230684 + 0 properly paired (88.91%:-nan%) 40717836 + 0 with itself and mate mapped 2280728 + 0 singletons (5.30%:-nan%) 298876 + 0 with mate mapped to a different chr 101484 + 0 with mate mapped to a different chr (mapQ>=5)