5125137 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 5125137 + 0 mapped (100.00%:-nan%) 5125137 + 0 paired in sequencing 2617547 + 0 read1 2507590 + 0 read2 1975630 + 0 properly paired (38.55%:-nan%) 4721966 + 0 with itself and mate mapped 403171 + 0 singletons (7.87%:-nan%) 2635724 + 0 with mate mapped to a different chr 0 + 0 with mate mapped to a different chr (mapQ>=5)