Left reads: Input : 29637158 Mapped : 21904757 (73.9% of input) of these: 627909 ( 2.9%) have multiple alignments (52277 have >20) Right reads: Input : 29637158 Mapped : 21093807 (71.2% of input) of these: 608374 ( 2.9%) have multiple alignments (52275 have >20) 72.5% overall read mapping rate. Aligned pairs: 20358918 of these: 579736 ( 2.8%) have multiple alignments 152528 ( 0.7%) are discordant alignments 68.2% concordant pair alignment rate.