41999237 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 41999237 + 0 mapped (100.00%:-nan%) 41999237 + 0 paired in sequencing 21335498 + 0 read1 20663739 + 0 read2 37480656 + 0 properly paired (89.24%:-nan%) 39775812 + 0 with itself and mate mapped 2223425 + 0 singletons (5.29%:-nan%) 105276 + 0 with mate mapped to a different chr 105276 + 0 with mate mapped to a different chr (mapQ>=5)