48740102 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 48740102 + 0 mapped (100.00%:-nan%) 48740102 + 0 paired in sequencing 24776825 + 0 read1 23963277 + 0 read2 40958396 + 0 properly paired (84.03%:-nan%) 45967894 + 0 with itself and mate mapped 2772208 + 0 singletons (5.69%:-nan%) 2690786 + 0 with mate mapped to a different chr 105276 + 0 with mate mapped to a different chr (mapQ>=5)