4464438 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 4464438 + 0 mapped (100.00%:-nan%) 4464438 + 0 paired in sequencing 2265282 + 0 read1 2199156 + 0 read2 1960736 + 0 properly paired (43.92%:-nan%) 3864444 + 0 with itself and mate mapped 599994 + 0 singletons (13.44%:-nan%) 1842698 + 0 with mate mapped to a different chr 0 + 0 with mate mapped to a different chr (mapQ>=5)