4383442 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 4383442 + 0 mapped (100.00%:-nan%) 4383442 + 0 paired in sequencing 2228276 + 0 read1 2155166 + 0 read2 1831446 + 0 properly paired (41.78%:-nan%) 4108674 + 0 with itself and mate mapped 274768 + 0 singletons (6.27%:-nan%) 2186466 + 0 with mate mapped to a different chr 0 + 0 with mate mapped to a different chr (mapQ>=5)