40983763 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 40983763 + 0 mapped (100.00%:-nan%) 40983763 + 0 paired in sequencing 20834991 + 0 read1 20148772 + 0 read2 36769968 + 0 properly paired (89.72%:-nan%) 38966488 + 0 with itself and mate mapped 2017275 + 0 singletons (4.92%:-nan%) 87550 + 0 with mate mapped to a different chr 87550 + 0 with mate mapped to a different chr (mapQ>=5)