41923042 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 41923042 + 0 mapped (100.00%:-nan%) 41923042 + 0 paired in sequencing 21311996 + 0 read1 20611046 + 0 read2 37484280 + 0 properly paired (89.41%:-nan%) 39844968 + 0 with itself and mate mapped 2078074 + 0 singletons (4.96%:-nan%) 227302 + 0 with mate mapped to a different chr 87550 + 0 with mate mapped to a different chr (mapQ>=5)