Left reads: Input : 28256339 Mapped : 21311996 (75.4% of input) of these: 477005 ( 2.2%) have multiple alignments (35326 have >20) Right reads: Input : 28256339 Mapped : 20611046 (72.9% of input) of these: 462274 ( 2.2%) have multiple alignments (35326 have >20) 74.2% overall read mapping rate. Aligned pairs: 19922484 of these: 439240 ( 2.2%) have multiple alignments 116853 ( 0.6%) are discordant alignments 70.1% concordant pair alignment rate.