Left reads: Input : 29623890 Mapped : 21847734 (73.8% of input) of these: 594864 ( 2.7%) have multiple alignments (40016 have >20) Right reads: Input : 29623890 Mapped : 21143470 (71.4% of input) of these: 577473 ( 2.7%) have multiple alignments (40017 have >20) 72.6% overall read mapping rate. Aligned pairs: 20438805 of these: 553057 ( 2.7%) have multiple alignments 125569 ( 0.6%) are discordant alignments 68.6% concordant pair alignment rate.