4688211 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 4688211 + 0 mapped (100.00%:-nan%) 4688211 + 0 paired in sequencing 2388987 + 0 read1 2299224 + 0 read2 2024900 + 0 properly paired (43.19%:-nan%) 4374218 + 0 with itself and mate mapped 313993 + 0 singletons (6.70%:-nan%) 2264422 + 0 with mate mapped to a different chr 0 + 0 with mate mapped to a different chr (mapQ>=5)