Left reads: Input : 28463849 Mapped : 20507939 (72.0% of input) of these: 486948 ( 2.4%) have multiple alignments (36132 have >20) Right reads: Input : 28463849 Mapped : 19768815 (69.5% of input) of these: 469702 ( 2.4%) have multiple alignments (36127 have >20) 70.8% overall read mapping rate. Aligned pairs: 19140796 of these: 450701 ( 2.4%) have multiple alignments 104298 ( 0.5%) are discordant alignments 66.9% concordant pair alignment rate.