track type=bigBed name=TADS_ABv4 description=Liver_TADs visibility=pack itemRgb=On bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/Lab_Files/TADS_ABv4.bb
track type=bigBed name="F_14_segments_recolored" description="UT_Female_Chromatin_Map" visibility=dense itemRgb="On" bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/Lab_Files/F_14_segments_recolored.bb
track type=bigBed name="M_14_segments_recolored" description="UT_Male_Chromatin_Map" visibility=dense itemRgb="On" bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/Lab_Files/M_14_segments_recolored.bb
track type=bigBed name="mm9-blacklist" description="ENCODE_mm9-blacklist" visibility=dense itemRgb="On" bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/Lab_Files/mm9-blacklist.bb
http://waxmanlabvm.bu.edu/tisha/gtf/ucsc_ncRNA_output_filtered_final_gene_putativeStrand.gtf
http://waxmanlabvm.bu.edu/aramp10/Lab_Files/Exon_Regions_UCSC.bed.gz
http://waxmanlabvm.bu.edu/aramp10/Lab_Files/Exon_Only_Regions_UCSC.bed.gz
http://waxmanlabvm.bu.edu/aramp10/Lab_Files/Intron_Only_Regions_UCSC.bed.gz
track type=bigWig name="G110_M1_Forward_norm" description="STAT5_High_Forward_norm" db=mm9 visibility=full autoScale=on viewLimits=0.0:100.0 color="255,0,0" yLineOnOff=off windowingFunction=mean smoothingWindow=3 maxHeightPixels=100:64:8 bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/G110/G110_M1.Forward.bw
track type=bigWig name="G110_M1_Reverse_norm" description="STAT5_High_Reverse_norm" db=mm9 visibility=full autoScale=on viewLimits=0.0:100.0 color="255,0,0" yLineOnOff=off windowingFunction=mean smoothingWindow=3 negateValues=off maxHeightPixels=100:64:8 bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/G110/G110_M1.Reverse.bw
track type=bam name="G110_M1_STAT5_High" description="G110_M1_STAT5_High" bamColorMode=strand db=mm9 visibility=hide bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/G110/G110_M1_primary_unique.bam
track type=bigWig name="G110_M2_Forward_norm" description="STAT5_High_Forward_norm" db=mm9 visibility=full autoScale=on viewLimits=0.0:100.0 color="255,0,0" yLineOnOff=off windowingFunction=mean smoothingWindow=3 maxHeightPixels=100:64:8 bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/G110/G110_M2.Forward.bw
track type=bigWig name="G110_M2_Reverse_norm" description="STAT5_High_Reverse_norm" db=mm9 visibility=full autoScale=on viewLimits=0.0:100.0 color="255,0,0" yLineOnOff=off windowingFunction=mean smoothingWindow=3 negateValues=off maxHeightPixels=100:64:8 bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/G110/G110_M2.Reverse.bw
track type=bam name="G110_M2_STAT5_High" description="G110_M2_STAT5_High" bamColorMode=strand db=mm9 visibility=hide bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/G110/G110_M2_primary_unique.bam
track type=bigWig name="G110_M3_Forward_norm" description="STAT5_Low_Forward_norm" db=mm9 visibility=full autoScale=on viewLimits=0.0:100.0 color="0,0,255" yLineOnOff=off windowingFunction=mean smoothingWindow=3 maxHeightPixels=100:64:8 bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/G110/G110_M3.Forward.bw
track type=bigWig name="G110_M3_Reverse_norm" description="STAT5_Low_Reverse_norm" db=mm9 visibility=full autoScale=on viewLimits=0.0:100.0 color="0,0,255" yLineOnOff=off windowingFunction=mean smoothingWindow=3 negateValues=off maxHeightPixels=100:64:8 bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/G110/G110_M3.Reverse.bw
track type=bam name="G110_M3_STAT5_Low" description="G110_M3_STAT5_Low" bamColorMode=strand db=mm9 visibility=hide bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/G110/G110_M3_primary_unique.bam
track type=bigWig name="G110_M4_Forward_norm" description="STAT5_Low_Forward_norm" db=mm9 visibility=full autoScale=on viewLimits=0.0:100.0 color="0,0,255" yLineOnOff=off windowingFunction=mean smoothingWindow=3 maxHeightPixels=100:64:8 bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/G110/G110_M4.Forward.bw
track type=bigWig name="G110_M4_Reverse_norm" description="STAT5_Low_Reverse_norm" db=mm9 visibility=full autoScale=on viewLimits=0.0:100.0 color="0,0,255" yLineOnOff=off windowingFunction=mean smoothingWindow=3 negateValues=off maxHeightPixels=100:64:8 bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/G110/G110_M4.Reverse.bw
track type=bam name="G110_M4_STAT5_Low" description="G110_M4_STAT5_Low" bamColorMode=strand db=mm9 visibility=hide bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/G110/G110_M4_primary_unique.bam
track type=bigWig name="G110_M5_Forward_norm" description="Hypox_male_Forward_norm" db=mm9 visibility=full autoScale=on viewLimits=0.0:100.0 color="0,128,0" yLineOnOff=off windowingFunction=mean smoothingWindow=3 maxHeightPixels=100:64:8 bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/G110/G110_M5.Forward.bw
track type=bigWig name="G110_M5_Reverse_norm" description="Hypox_male_Reverse_norm" db=mm9 visibility=full autoScale=on viewLimits=0.0:100.0 color="0,128,0" yLineOnOff=off windowingFunction=mean smoothingWindow=3 negateValues=off maxHeightPixels=100:64:8 bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/G110/G110_M5.Reverse.bw
track type=bam name="G110_M5_Hypox_male" description="G110_M5_Hypox_male" bamColorMode=strand db=mm9 visibility=hide bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/G110/G110_M5_primary_unique.bam
track type=bigWig name="G110_M6_Forward_norm" description="Hypox_male_Forward_norm" db=mm9 visibility=full autoScale=on viewLimits=0.0:100.0 color="0,128,0" yLineOnOff=off windowingFunction=mean smoothingWindow=3 maxHeightPixels=100:64:8 bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/G110/G110_M6.Forward.bw
track type=bigWig name="G110_M6_Reverse_norm" description="Hypox_male_Reverse_norm" db=mm9 visibility=full autoScale=on viewLimits=0.0:100.0 color="0,128,0" yLineOnOff=off windowingFunction=mean smoothingWindow=3 negateValues=off maxHeightPixels=100:64:8 bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/G110/G110_M6.Reverse.bw
track type=bam name="G110_M6_Hypox_male" description="G110_M6_Hypox_male" bamColorMode=strand db=mm9 visibility=hide bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/G110/G110_M6_primary_unique.bam
track type=bigWig name="G110_M7_Forward_norm" description="Hypox_30min_Forward_norm" db=mm9 visibility=full autoScale=on viewLimits=0.0:100.0 color="139,0,0" yLineOnOff=off windowingFunction=mean smoothingWindow=3 maxHeightPixels=100:64:8 bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/G110/G110_M7.Forward.bw
track type=bigWig name="G110_M7_Reverse_norm" description="Hypox_30min_Reverse_norm" db=mm9 visibility=full autoScale=on viewLimits=0.0:100.0 color="139,0,0" yLineOnOff=off windowingFunction=mean smoothingWindow=3 negateValues=off maxHeightPixels=100:64:8 bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/G110/G110_M7.Reverse.bw
track type=bam name="G110_M7_Hypox_30min" description="G110_M7_Hypox_30min" bamColorMode=strand db=mm9 visibility=hide bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/G110/G110_M7_primary_unique.bam
track type=bigWig name="G110_M8_Forward_norm" description="Hypox_30min_Forward_norm" db=mm9 visibility=full autoScale=on viewLimits=0.0:100.0 color="139,0,0" yLineOnOff=off windowingFunction=mean smoothingWindow=3 maxHeightPixels=100:64:8 bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/G110/G110_M8.Forward.bw
track type=bigWig name="G110_M8_Reverse_norm" description="Hypox_30min_Reverse_norm" db=mm9 visibility=full autoScale=on viewLimits=0.0:100.0 color="139,0,0" yLineOnOff=off windowingFunction=mean smoothingWindow=3 negateValues=off maxHeightPixels=100:64:8 bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/G110/G110_M8.Reverse.bw
track type=bam name="G110_M8_Hypox_30min" description="G110_M8_Hypox_30min" bamColorMode=strand db=mm9 visibility=hide bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/G110/G110_M8_primary_unique.bam
track type=bigWig name="G110_M9_Forward_norm" description="Hypox_90min_Forward_norm" db=mm9 visibility=full autoScale=on viewLimits=0.0:100.0 color="165,42,42" yLineOnOff=off windowingFunction=mean smoothingWindow=3 maxHeightPixels=100:64:8 bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/G110/G110_M9.Forward.bw
track type=bigWig name="G110_M9_Reverse_norm" description="Hypox_90min_Reverse_norm" db=mm9 visibility=full autoScale=on viewLimits=0.0:100.0 color="165,42,42" yLineOnOff=off windowingFunction=mean smoothingWindow=3 negateValues=off maxHeightPixels=100:64:8 bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/G110/G110_M9.Reverse.bw
track type=bam name="G110_M9_Hypox_90min" description="G110_M9_Hypox_90min" bamColorMode=strand db=mm9 visibility=hide bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/G110/G110_M9_primary_unique.bam
track type=bigWig name="G110_M10_Forward_norm" description="Hypox_90min_Forward_norm" db=mm9 visibility=full autoScale=on viewLimits=0.0:100.0 color="165,42,42" yLineOnOff=off windowingFunction=mean smoothingWindow=3 maxHeightPixels=100:64:8 bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/G110/G110_M10.Forward.bw
track type=bigWig name="G110_M10_Reverse_norm" description="Hypox_90min_Reverse_norm" db=mm9 visibility=full autoScale=on viewLimits=0.0:100.0 color="165,42,42" yLineOnOff=off windowingFunction=mean smoothingWindow=3 negateValues=off maxHeightPixels=100:64:8 bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/G110/G110_M10.Reverse.bw
track type=bam name="G110_M10_Hypox_90min" description="G110_M10_Hypox_90min" bamColorMode=strand db=mm9 visibility=hide bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/G110/G110_M10_primary_unique.bam
track type=bigWig name="G110_M11_Forward_norm" description="Hypox_240min_Forward_norm" db=mm9 visibility=full autoScale=on viewLimits=0.0:100.0 color="255,69,0" yLineOnOff=off windowingFunction=mean smoothingWindow=3 maxHeightPixels=100:64:8 bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/G110/G110_M11.Forward.bw
track type=bigWig name="G110_M11_Reverse_norm" description="Hypox_240min_Reverse_norm" db=mm9 visibility=full autoScale=on viewLimits=0.0:100.0 color="255,69,0" yLineOnOff=off windowingFunction=mean smoothingWindow=3 negateValues=off maxHeightPixels=100:64:8 bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/G110/G110_M11.Reverse.bw
track type=bam name="G110_M11_Hypox_240min" description="G110_M11_Hypox_240min" bamColorMode=strand db=mm9 visibility=hide bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/G110/G110_M11_primary_unique.bam
track type=bigWig name="G110_M12_Forward_norm" description="Hypox_240min_Forward_norm" db=mm9 visibility=full autoScale=on viewLimits=0.0:100.0 color="255,69,0" yLineOnOff=off windowingFunction=mean smoothingWindow=3 maxHeightPixels=100:64:8 bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/G110/G110_M12.Forward.bw
track type=bigWig name="G110_M12_Reverse_norm" description="Hypox_240min_Reverse_norm" db=mm9 visibility=full autoScale=on viewLimits=0.0:100.0 color="255,69,0" yLineOnOff=off windowingFunction=mean smoothingWindow=3 negateValues=off maxHeightPixels=100:64:8 bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/G110/G110_M12.Reverse.bw
track type=bam name="G110_M12_Hypox_240min" description="G110_M12_Hypox_240min" bamColorMode=strand db=mm9 visibility=hide bigDataUrl=http://waxmanlabvm.bu.edu/aramp10/G110/G110_M12_primary_unique.bam