Left reads: Input : 20703604 Mapped : 12132393 (58.6% of input) of these: 1478591 (12.2%) have multiple alignments (42552 have >20) Right reads: Input : 20703604 Mapped : 11692696 (56.5% of input) of these: 1441044 (12.3%) have multiple alignments (42592 have >20) 57.5% overall read mapping rate. Aligned pairs: 11325443 of these: 1384746 (12.2%) have multiple alignments 91222 ( 0.8%) are discordant alignments 54.3% concordant pair alignment rate.