Left reads: Input : 32099910 Mapped : 31007233 (96.6% of input) of these: 5382606 (17.4%) have multiple alignments (1020757 have >20) Right reads: Input : 32099910 Mapped : 30639178 (95.4% of input) of these: 5321532 (17.4%) have multiple alignments (1018809 have >20) 96.0% overall read mapping rate. Aligned pairs: 30040257 of these: 5215613 (17.4%) have multiple alignments 190675 ( 0.6%) are discordant alignments 93.0% concordant pair alignment rate.