==> Step_05_KI1.e5781648 <== real 0m3.390s user 0m0.052s sys 0m0.013s Reading reference gene model mm9.refseq.bed ... Done Loading SAM/BAM file ... Total 200000 usable reads were sampled ==> Step_05_KI10.e5781657 <== real 0m1.170s user 0m0.060s sys 0m0.010s Reading reference gene model mm9.refseq.bed ... Done Loading SAM/BAM file ... Total 200000 usable reads were sampled ==> Step_05_KI11.e5781658 <== real 0m1.541s user 0m0.062s sys 0m0.009s Reading reference gene model mm9.refseq.bed ... Done Loading SAM/BAM file ... Total 200000 usable reads were sampled ==> Step_05_KI12.e5781659 <== real 0m0.293s user 0m0.070s sys 0m0.009s Reading reference gene model mm9.refseq.bed ... Done Loading SAM/BAM file ... Total 200000 usable reads were sampled ==> Step_05_KI2.e5781649 <== real 0m0.308s user 0m0.063s sys 0m0.009s Reading reference gene model mm9.refseq.bed ... Done Loading SAM/BAM file ... Total 200000 usable reads were sampled ==> Step_05_KI3.e5781650 <== real 0m3.723s user 0m0.057s sys 0m0.008s Reading reference gene model mm9.refseq.bed ... Done Loading SAM/BAM file ... Total 200000 usable reads were sampled ==> Step_05_KI4.e5781651 <== real 0m0.403s user 0m0.067s sys 0m0.008s Reading reference gene model mm9.refseq.bed ... Done Loading SAM/BAM file ... Total 200000 usable reads were sampled ==> Step_05_KI5.e5781652 <== real 0m2.380s user 0m0.064s sys 0m0.008s Reading reference gene model mm9.refseq.bed ... Done Loading SAM/BAM file ... Total 200000 usable reads were sampled ==> Step_05_KI6.e5781653 <== real 0m2.761s user 0m0.054s sys 0m0.009s Reading reference gene model mm9.refseq.bed ... Done Loading SAM/BAM file ... Total 200000 usable reads were sampled ==> Step_05_KI7.e5781654 <== real 0m2.943s user 0m0.059s sys 0m0.009s Reading reference gene model mm9.refseq.bed ... Done Loading SAM/BAM file ... Total 200000 usable reads were sampled ==> Step_05_KI8.e5781655 <== real 0m0.453s user 0m0.067s sys 0m0.011s Reading reference gene model mm9.refseq.bed ... Done Loading SAM/BAM file ... Total 200000 usable reads were sampled ==> Step_05_KI9.e5781656 <== real 0m0.283s user 0m0.053s sys 0m0.019s Reading reference gene model mm9.refseq.bed ... Done Loading SAM/BAM file ... Total 200000 usable reads were sampled ==> Step_05_WT1.e5781627 <== real 0m0.234s user 0m0.050s sys 0m0.012s Reading reference gene model mm9.refseq.bed ... Done Loading SAM/BAM file ... Total 200000 usable reads were sampled ==> Step_05_WT10.e5781644 <== real 0m0.224s user 0m0.098s sys 0m0.011s Reading reference gene model mm9.refseq.bed ... Done Loading SAM/BAM file ... Total 200000 usable reads were sampled ==> Step_05_WT11.e5781646 <== real 0m3.222s user 0m0.069s sys 0m0.008s Reading reference gene model mm9.refseq.bed ... Done Loading SAM/BAM file ... Total 200000 usable reads were sampled ==> Step_05_WT12.e5781647 <== real 0m3.303s user 0m0.055s sys 0m0.009s Reading reference gene model mm9.refseq.bed ... Done Loading SAM/BAM file ... Total 200000 usable reads were sampled ==> Step_05_WT2.e5781628 <== real 0m3.343s user 0m0.063s sys 0m0.012s Reading reference gene model mm9.refseq.bed ... Done Loading SAM/BAM file ... Total 200000 usable reads were sampled ==> Step_05_WT3.e5781630 <== real 0m3.939s user 0m0.060s sys 0m0.010s Reading reference gene model mm9.refseq.bed ... Done Loading SAM/BAM file ... Total 200000 usable reads were sampled ==> Step_05_WT4.e5781632 <== real 0m3.575s user 0m0.052s sys 0m0.015s Reading reference gene model mm9.refseq.bed ... Done Loading SAM/BAM file ... Total 200000 usable reads were sampled ==> Step_05_WT5.e5781634 <== real 0m6.197s user 0m0.059s sys 0m0.019s Reading reference gene model mm9.refseq.bed ... Done Loading SAM/BAM file ... Total 200000 usable reads were sampled ==> Step_05_WT6.e5781636 <== real 0m2.062s user 0m0.059s sys 0m0.011s Reading reference gene model mm9.refseq.bed ... Done Loading SAM/BAM file ... Total 200000 usable reads were sampled ==> Step_05_WT7.e5781638 <== real 0m0.431s user 0m0.064s sys 0m0.016s Reading reference gene model mm9.refseq.bed ... Done Loading SAM/BAM file ... Total 200000 usable reads were sampled ==> Step_05_WT8.e5781640 <== real 0m0.299s user 0m0.062s sys 0m0.014s Reading reference gene model mm9.refseq.bed ... Done Loading SAM/BAM file ... Total 200000 usable reads were sampled ==> Step_05_WT9.e5781642 <== real 0m3.759s user 0m0.060s sys 0m0.014s Reading reference gene model mm9.refseq.bed ... Done Loading SAM/BAM file ... Total 200000 usable reads were sampled