#--------------------------------------------------------------
Run time for each submitted job:
Job run times that deviate from the average should be inspected for possible errors (check the job log files)
#--------------------------------------------------------------
02_FASTQC
Step_02_Cyp2bnull_HFD_M1.o5812625:0 hours, 30 minutes and 24 seconds elapsed.
Step_02_Cyp2bnull_HFD_M2.o5812626:0 hours, 15 minutes and 27 seconds elapsed.
Step_02_Cyp2bnull_HFD_M3.o5812627:0 hours, 14 minutes and 54 seconds elapsed.
Step_02_Cyp2bnull_ND_M1.o5812619:0 hours, 17 minutes and 43 seconds elapsed.
Step_02_Cyp2bnull_ND_M2.o5812620:0 hours, 34 minutes and 4 seconds elapsed.
Step_02_Cyp2bnull_ND_M3.o5812621:0 hours, 17 minutes and 10 seconds elapsed.
Step_02_WT_HFD_M1.o5812622:0 hours, 18 minutes and 6 seconds elapsed.
Step_02_WT_HFD_M2.o5812623:0 hours, 11 minutes and 3 seconds elapsed.
Step_02_WT_HFD_M3.o5812624:0 hours, 23 minutes and 57 seconds elapsed.
Step_02_WT_ND_M1.o5812616:0 hours, 9 minutes and 51 seconds elapsed.
Step_02_WT_ND_M2.o5812617:0 hours, 26 minutes and 22 seconds elapsed.
Step_02_WT_ND_M3.o5812618:0 hours, 22 minutes and 45 seconds elapsed.
03_Read_Length
Step_03_Cyp2bnull_HFD_M1.o5812873:0 hours, 6 minutes and 10 seconds elapsed.
Step_03_Cyp2bnull_HFD_M2.o5812874:0 hours, 3 minutes and 18 seconds elapsed.
Step_03_Cyp2bnull_HFD_M3.o5812875:0 hours, 8 minutes and 45 seconds elapsed.
Step_03_Cyp2bnull_ND_M1.o5812867:0 hours, 10 minutes and 16 seconds elapsed.
Step_03_Cyp2bnull_ND_M2.o5812868:0 hours, 12 minutes and 1 seconds elapsed.
Step_03_Cyp2bnull_ND_M3.o5812869:0 hours, 6 minutes and 40 seconds elapsed.
Step_03_WT_HFD_M1.o5812870:0 hours, 5 minutes and 52 seconds elapsed.
Step_03_WT_HFD_M2.o5812871:0 hours, 7 minutes and 56 seconds elapsed.
Step_03_WT_HFD_M3.o5812872:0 hours, 9 minutes and 49 seconds elapsed.
Step_03_WT_ND_M1.o5812864:0 hours, 9 minutes and 23 seconds elapsed.
Step_03_WT_ND_M2.o5812865:0 hours, 10 minutes and 4 seconds elapsed.
Step_03_WT_ND_M3.o5812866:0 hours, 11 minutes and 57 seconds elapsed.
04_TopHat_Paired_End
Step_04_Cyp2bnull_HFD_M1.o5813054:11 hours, 28 minutes and 44 seconds elapsed.
Step_04_Cyp2bnull_HFD_M2.o5813055:9 hours, 1 minutes and 13 seconds elapsed.
Step_04_Cyp2bnull_HFD_M3.o5813056:8 hours, 1 minutes and 35 seconds elapsed.
Step_04_Cyp2bnull_ND_M1.o5813048:6 hours, 1 minutes and 23 seconds elapsed.
Step_04_Cyp2bnull_ND_M2.o5813049:13 hours, 50 minutes and 6 seconds elapsed.
Step_04_Cyp2bnull_ND_M3.o5813050:8 hours, 42 minutes and 49 seconds elapsed.
Step_04_WT_HFD_M1.o5813051:10 hours, 9 minutes and 24 seconds elapsed.
Step_04_WT_HFD_M2.o5813052:8 hours, 37 minutes and 18 seconds elapsed.
Step_04_WT_HFD_M3.o5813053:13 hours, 12 minutes and 21 seconds elapsed.
Step_04_WT_ND_M1.o5813045:7 hours, 37 minutes and 16 seconds elapsed.
Step_04_WT_ND_M2.o5813046:6 hours, 45 minutes and 4 seconds elapsed.
Step_04_WT_ND_M3.o5813047:11 hours, 20 minutes and 58 seconds elapsed.
05_Read_Strandness
Step_05_Cyp2bnull_HFD_M1.o5824116:0 hours, 2 minutes and 10 seconds elapsed.
Step_05_Cyp2bnull_HFD_M2.o5824117:0 hours, 1 minutes and 46 seconds elapsed.
Step_05_Cyp2bnull_HFD_M3.o5824118:0 hours, 1 minutes and 2 seconds elapsed.
Step_05_Cyp2bnull_ND_M1.o5824110:0 hours, 2 minutes and 37 seconds elapsed.
Step_05_Cyp2bnull_ND_M2.o5824111:0 hours, 2 minutes and 39 seconds elapsed.
Step_05_Cyp2bnull_ND_M3.o5824112:0 hours, 2 minutes and 37 seconds elapsed.
Step_05_WT_HFD_M1.o5824113:0 hours, 2 minutes and 39 seconds elapsed.
Step_05_WT_HFD_M2.o5824114:0 hours, 1 minutes and 46 seconds elapsed.
Step_05_WT_HFD_M3.o5824115:0 hours, 2 minutes and 9 seconds elapsed.
Step_05_WT_ND_M1.o5824107:0 hours, 1 minutes and 38 seconds elapsed.
Step_05_WT_ND_M2.o5824108:0 hours, 1 minutes and 39 seconds elapsed.
Step_05_WT_ND_M3.o5824109:0 hours, 2 minutes and 39 seconds elapsed.
06_CollectRnaSeqMetrics
Step_06_Cyp2bnull_HFD_M1.o5824148:0 hours, 8 minutes and 53 seconds elapsed.
Step_06_Cyp2bnull_HFD_M2.o5824149:0 hours, 6 minutes and 48 seconds elapsed.
Step_06_Cyp2bnull_HFD_M3.o5824150:0 hours, 6 minutes and 18 seconds elapsed.
Step_06_Cyp2bnull_ND_M1.o5824142:0 hours, 8 minutes and 14 seconds elapsed.
Step_06_Cyp2bnull_ND_M2.o5824143:0 hours, 12 minutes and 48 seconds elapsed.
Step_06_Cyp2bnull_ND_M3.o5824144:0 hours, 9 minutes and 49 seconds elapsed.
Step_06_WT_HFD_M1.o5824145:0 hours, 9 minutes and 29 seconds elapsed.
Step_06_WT_HFD_M2.o5824146:0 hours, 4 minutes and 23 seconds elapsed.
Step_06_WT_HFD_M3.o5824147:0 hours, 14 minutes and 32 seconds elapsed.
Step_06_WT_ND_M1.o5824139:0 hours, 6 minutes and 57 seconds elapsed.
Step_06_WT_ND_M2.o5824140:0 hours, 9 minutes and 43 seconds elapsed.
Step_06_WT_ND_M3.o5824141:0 hours, 12 minutes and 24 seconds elapsed.
07_CollectInsertSizeMetrics
Step_07_Cyp2bnull_HFD_M1.o5824168:0 hours, 5 minutes and 0 seconds elapsed.
Step_07_Cyp2bnull_HFD_M2.o5824169:0 hours, 4 minutes and 10 seconds elapsed.
Step_07_Cyp2bnull_HFD_M3.o5824170:0 hours, 4 minutes and 23 seconds elapsed.
Step_07_Cyp2bnull_ND_M1.o5824162:0 hours, 5 minutes and 52 seconds elapsed.
Step_07_Cyp2bnull_ND_M2.o5824163:0 hours, 6 minutes and 29 seconds elapsed.
Step_07_Cyp2bnull_ND_M3.o5824164:0 hours, 5 minutes and 56 seconds elapsed.
Step_07_WT_HFD_M1.o5824165:0 hours, 5 minutes and 19 seconds elapsed.
Step_07_WT_HFD_M2.o5824166:0 hours, 4 minutes and 45 seconds elapsed.
Step_07_WT_HFD_M3.o5824167:0 hours, 6 minutes and 24 seconds elapsed.
Step_07_WT_ND_M1.o5824159:0 hours, 5 minutes and 4 seconds elapsed.
Step_07_WT_ND_M2.o5824160:0 hours, 5 minutes and 51 seconds elapsed.
Step_07_WT_ND_M3.o5824161:0 hours, 6 minutes and 48 seconds elapsed.
08a_Extract_Counts_HTSeq
Step_08a_Cyp2bnull_HFD_M1.o5824210:0 hours, 43 minutes and 57 seconds elapsed.
Step_08a_Cyp2bnull_HFD_M1.o5824211:0 hours, 54 minutes and 12 seconds elapsed.
Step_08a_Cyp2bnull_HFD_M1.o5824212:1 hours, 26 minutes and 51 seconds elapsed.
Step_08a_Cyp2bnull_HFD_M1.o5824213:1 hours, 28 minutes and 29 seconds elapsed.
Step_08a_Cyp2bnull_HFD_M2.o5824214:0 hours, 56 minutes and 11 seconds elapsed.
Step_08a_Cyp2bnull_HFD_M2.o5824215:0 hours, 46 minutes and 55 seconds elapsed.
Step_08a_Cyp2bnull_HFD_M2.o5824216:1 hours, 6 minutes and 51 seconds elapsed.
Step_08a_Cyp2bnull_HFD_M2.o5824217:1 hours, 8 minutes and 8 seconds elapsed.
Step_08a_Cyp2bnull_HFD_M3.o5824218:0 hours, 29 minutes and 31 seconds elapsed.
Step_08a_Cyp2bnull_HFD_M3.o5824219:0 hours, 35 minutes and 1 seconds elapsed.
Step_08a_Cyp2bnull_HFD_M3.o5824220:1 hours, 1 minutes and 20 seconds elapsed.
Step_08a_Cyp2bnull_HFD_M3.o5824221:1 hours, 1 minutes and 19 seconds elapsed.
Step_08a_Cyp2bnull_ND_M1.o5824186:0 hours, 53 minutes and 19 seconds elapsed.
Step_08a_Cyp2bnull_ND_M1.o5824187:1 hours, 7 minutes and 13 seconds elapsed.
Step_08a_Cyp2bnull_ND_M1.o5824188:1 hours, 10 minutes and 26 seconds elapsed.
Step_08a_Cyp2bnull_ND_M1.o5824189:1 hours, 10 minutes and 5 seconds elapsed.
Step_08a_Cyp2bnull_ND_M2.o5824190:0 hours, 55 minutes and 28 seconds elapsed.
Step_08a_Cyp2bnull_ND_M2.o5824191:2 hours, 7 minutes and 54 seconds elapsed.
Step_08a_Cyp2bnull_ND_M2.o5824192:1 hours, 42 minutes and 58 seconds elapsed.
Step_08a_Cyp2bnull_ND_M2.o5824193:1 hours, 43 minutes and 6 seconds elapsed.
Step_08a_Cyp2bnull_ND_M3.o5824194:0 hours, 41 minutes and 49 seconds elapsed.
Step_08a_Cyp2bnull_ND_M3.o5824195:0 hours, 52 minutes and 2 seconds elapsed.
Step_08a_Cyp2bnull_ND_M3.o5824196:1 hours, 37 minutes and 33 seconds elapsed.
Step_08a_Cyp2bnull_ND_M3.o5824197:1 hours, 36 minutes and 24 seconds elapsed.
Step_08a_WT_HFD_M1.o5824198:0 hours, 50 minutes and 59 seconds elapsed.
Step_08a_WT_HFD_M1.o5824199:0 hours, 48 minutes and 15 seconds elapsed.
Step_08a_WT_HFD_M1.o5824200:1 hours, 27 minutes and 37 seconds elapsed.
Step_08a_WT_HFD_M1.o5824201:1 hours, 30 minutes and 45 seconds elapsed.
Step_08a_WT_HFD_M2.o5824202:0 hours, 23 minutes and 39 seconds elapsed.
Step_08a_WT_HFD_M2.o5824203:0 hours, 54 minutes and 10 seconds elapsed.
Step_08a_WT_HFD_M2.o5824204:0 hours, 51 minutes and 4 seconds elapsed.
Step_08a_WT_HFD_M2.o5824205:0 hours, 50 minutes and 23 seconds elapsed.
Step_08a_WT_HFD_M3.o5824206:1 hours, 8 minutes and 1 seconds elapsed.
Step_08a_WT_HFD_M3.o5824207:1 hours, 23 minutes and 44 seconds elapsed.
Step_08a_WT_HFD_M3.o5824208:2 hours, 17 minutes and 12 seconds elapsed.
Step_08a_WT_HFD_M3.o5824209:2 hours, 13 minutes and 48 seconds elapsed.
Step_08a_WT_ND_M1.o5824174:0 hours, 31 minutes and 44 seconds elapsed.
Step_08a_WT_ND_M1.o5824175:0 hours, 37 minutes and 57 seconds elapsed.
Step_08a_WT_ND_M1.o5824176:1 hours, 3 minutes and 3 seconds elapsed.
Step_08a_WT_ND_M1.o5824177:1 hours, 2 minutes and 29 seconds elapsed.
Step_08a_WT_ND_M2.o5824178:0 hours, 40 minutes and 3 seconds elapsed.
Step_08a_WT_ND_M2.o5824179:0 hours, 48 minutes and 49 seconds elapsed.
Step_08a_WT_ND_M2.o5824180:1 hours, 26 minutes and 39 seconds elapsed.
Step_08a_WT_ND_M2.o5824181:1 hours, 32 minutes and 27 seconds elapsed.
Step_08a_WT_ND_M3.o5824182:1 hours, 0 minutes and 11 seconds elapsed.
Step_08a_WT_ND_M3.o5824183:1 hours, 14 minutes and 24 seconds elapsed.
Step_08a_WT_ND_M3.o5824184:1 hours, 57 minutes and 33 seconds elapsed.
Step_08a_WT_ND_M3.o5824185:2 hours, 1 minutes and 43 seconds elapsed.
08b_Extract_Counts_featureCounts
Step_08b_Cyp2bnull_HFD_M1.o5824928:0 hours, 27 minutes and 7 seconds elapsed.
Step_08b_Cyp2bnull_HFD_M1.o5824930:0 hours, 33 minutes and 30 seconds elapsed.
Step_08b_Cyp2bnull_HFD_M1.o5824932:0 hours, 30 minutes and 42 seconds elapsed.
Step_08b_Cyp2bnull_HFD_M1.o5824934:0 hours, 22 minutes and 19 seconds elapsed.
Step_08b_Cyp2bnull_HFD_M1.o5824936:0 hours, 21 minutes and 14 seconds elapsed.
Step_08b_Cyp2bnull_HFD_M1.o5824938:0 hours, 28 minutes and 50 seconds elapsed.
Step_08b_Cyp2bnull_HFD_M1.o5824940:0 hours, 31 minutes and 22 seconds elapsed.
Step_08b_Cyp2bnull_HFD_M1.o5824942:0 hours, 30 minutes and 51 seconds elapsed.
Step_08b_Cyp2bnull_HFD_M2.o5824944:0 hours, 19 minutes and 56 seconds elapsed.
Step_08b_Cyp2bnull_HFD_M2.o5824946:0 hours, 27 minutes and 14 seconds elapsed.
Step_08b_Cyp2bnull_HFD_M2.o5824948:0 hours, 30 minutes and 53 seconds elapsed.
Step_08b_Cyp2bnull_HFD_M2.o5824950:0 hours, 20 minutes and 54 seconds elapsed.
Step_08b_Cyp2bnull_HFD_M2.o5824952:0 hours, 16 minutes and 30 seconds elapsed.
Step_08b_Cyp2bnull_HFD_M2.o5824954:0 hours, 26 minutes and 40 seconds elapsed.
Step_08b_Cyp2bnull_HFD_M2.o5824956:0 hours, 17 minutes and 3 seconds elapsed.
Step_08b_Cyp2bnull_HFD_M2.o5824958:0 hours, 25 minutes and 39 seconds elapsed.
Step_08b_Cyp2bnull_HFD_M3.o5824960:0 hours, 19 minutes and 0 seconds elapsed.
Step_08b_Cyp2bnull_HFD_M3.o5824962:0 hours, 16 minutes and 3 seconds elapsed.
Step_08b_Cyp2bnull_HFD_M3.o5824964:0 hours, 19 minutes and 45 seconds elapsed.
Step_08b_Cyp2bnull_HFD_M3.o5824966:0 hours, 15 minutes and 42 seconds elapsed.
Step_08b_Cyp2bnull_HFD_M3.o5824968:0 hours, 15 minutes and 15 seconds elapsed.
Step_08b_Cyp2bnull_HFD_M3.o5824970:0 hours, 21 minutes and 24 seconds elapsed.
Step_08b_Cyp2bnull_HFD_M3.o5824972:0 hours, 29 minutes and 16 seconds elapsed.
Step_08b_Cyp2bnull_HFD_M3.o5824974:0 hours, 23 minutes and 52 seconds elapsed.
Step_08b_Cyp2bnull_ND_M1.o5824832:1 hours, 6 minutes and 40 seconds elapsed.
Step_08b_Cyp2bnull_ND_M1.o5824834:1 hours, 12 minutes and 14 seconds elapsed.
Step_08b_Cyp2bnull_ND_M1.o5824836:0 hours, 34 minutes and 15 seconds elapsed.
Step_08b_Cyp2bnull_ND_M1.o5824838:0 hours, 19 minutes and 5 seconds elapsed.
Step_08b_Cyp2bnull_ND_M1.o5824840:0 hours, 25 minutes and 48 seconds elapsed.
Step_08b_Cyp2bnull_ND_M1.o5824842:0 hours, 34 minutes and 15 seconds elapsed.
Step_08b_Cyp2bnull_ND_M1.o5824844:0 hours, 25 minutes and 50 seconds elapsed.
Step_08b_Cyp2bnull_ND_M1.o5824846:0 hours, 25 minutes and 19 seconds elapsed.
Step_08b_Cyp2bnull_ND_M2.o5824848:0 hours, 31 minutes and 5 seconds elapsed.
Step_08b_Cyp2bnull_ND_M2.o5824850:0 hours, 28 minutes and 21 seconds elapsed.
Step_08b_Cyp2bnull_ND_M2.o5824852:0 hours, 44 minutes and 12 seconds elapsed.
Step_08b_Cyp2bnull_ND_M2.o5824854:0 hours, 26 minutes and 45 seconds elapsed.
Step_08b_Cyp2bnull_ND_M2.o5824856:0 hours, 24 minutes and 56 seconds elapsed.
Step_08b_Cyp2bnull_ND_M2.o5824858:1 hours, 6 minutes and 2 seconds elapsed.
Step_08b_Cyp2bnull_ND_M2.o5824860:0 hours, 25 minutes and 9 seconds elapsed.
Step_08b_Cyp2bnull_ND_M2.o5824862:0 hours, 34 minutes and 59 seconds elapsed.
Step_08b_Cyp2bnull_ND_M3.o5824864:0 hours, 17 minutes and 3 seconds elapsed.
Step_08b_Cyp2bnull_ND_M3.o5824866:0 hours, 31 minutes and 37 seconds elapsed.
Step_08b_Cyp2bnull_ND_M3.o5824868:0 hours, 33 minutes and 8 seconds elapsed.
Step_08b_Cyp2bnull_ND_M3.o5824870:0 hours, 20 minutes and 42 seconds elapsed.
Step_08b_Cyp2bnull_ND_M3.o5824872:0 hours, 31 minutes and 23 seconds elapsed.
Step_08b_Cyp2bnull_ND_M3.o5824874:0 hours, 32 minutes and 21 seconds elapsed.
Step_08b_Cyp2bnull_ND_M3.o5824876:0 hours, 26 minutes and 32 seconds elapsed.
Step_08b_Cyp2bnull_ND_M3.o5824878:0 hours, 27 minutes and 7 seconds elapsed.
Step_08b_WT_HFD_M1.o5824880:0 hours, 16 minutes and 34 seconds elapsed.
Step_08b_WT_HFD_M1.o5824882:0 hours, 30 minutes and 45 seconds elapsed.
Step_08b_WT_HFD_M1.o5824884:0 hours, 37 minutes and 4 seconds elapsed.
Step_08b_WT_HFD_M1.o5824886:0 hours, 21 minutes and 24 seconds elapsed.
Step_08b_WT_HFD_M1.o5824888:0 hours, 20 minutes and 3 seconds elapsed.
Step_08b_WT_HFD_M1.o5824890:0 hours, 27 minutes and 14 seconds elapsed.
Step_08b_WT_HFD_M1.o5824892:0 hours, 20 minutes and 57 seconds elapsed.
Step_08b_WT_HFD_M1.o5824894:0 hours, 22 minutes and 55 seconds elapsed.
Step_08b_WT_HFD_M2.o5824896:0 hours, 15 minutes and 10 seconds elapsed.
Step_08b_WT_HFD_M2.o5824898:0 hours, 13 minutes and 52 seconds elapsed.
Step_08b_WT_HFD_M2.o5824900:0 hours, 20 minutes and 51 seconds elapsed.
Step_08b_WT_HFD_M2.o5824902:0 hours, 12 minutes and 41 seconds elapsed.
Step_08b_WT_HFD_M2.o5824904:0 hours, 17 minutes and 3 seconds elapsed.
Step_08b_WT_HFD_M2.o5824906:0 hours, 11 minutes and 27 seconds elapsed.
Step_08b_WT_HFD_M2.o5824908:0 hours, 17 minutes and 3 seconds elapsed.
Step_08b_WT_HFD_M2.o5824910:0 hours, 16 minutes and 52 seconds elapsed.
Step_08b_WT_HFD_M3.o5824912:0 hours, 38 minutes and 41 seconds elapsed.
Step_08b_WT_HFD_M3.o5824914:1 hours, 0 minutes and 30 seconds elapsed.
Step_08b_WT_HFD_M3.o5824916:1 hours, 3 minutes and 18 seconds elapsed.
Step_08b_WT_HFD_M3.o5824918:0 hours, 34 minutes and 26 seconds elapsed.
Step_08b_WT_HFD_M3.o5824920:0 hours, 49 minutes and 16 seconds elapsed.
Step_08b_WT_HFD_M3.o5824922:0 hours, 32 minutes and 35 seconds elapsed.
Step_08b_WT_HFD_M3.o5824924:0 hours, 33 minutes and 53 seconds elapsed.
Step_08b_WT_HFD_M3.o5824926:0 hours, 48 minutes and 29 seconds elapsed.
Step_08b_WT_ND_M1.o5824784:0 hours, 20 minutes and 2 seconds elapsed.
Step_08b_WT_ND_M1.o5824786:0 hours, 24 minutes and 19 seconds elapsed.
Step_08b_WT_ND_M1.o5824788:0 hours, 28 minutes and 39 seconds elapsed.
Step_08b_WT_ND_M1.o5824790:0 hours, 17 minutes and 20 seconds elapsed.
Step_08b_WT_ND_M1.o5824792:0 hours, 22 minutes and 44 seconds elapsed.
Step_08b_WT_ND_M1.o5824794:0 hours, 21 minutes and 44 seconds elapsed.
Step_08b_WT_ND_M1.o5824796:0 hours, 24 minutes and 2 seconds elapsed.
Step_08b_WT_ND_M1.o5824798:0 hours, 23 minutes and 45 seconds elapsed.
Step_08b_WT_ND_M2.o5824800:0 hours, 27 minutes and 26 seconds elapsed.
Step_08b_WT_ND_M2.o5824802:0 hours, 33 minutes and 0 seconds elapsed.
Step_08b_WT_ND_M2.o5824804:0 hours, 40 minutes and 6 seconds elapsed.
Step_08b_WT_ND_M2.o5824806:0 hours, 22 minutes and 8 seconds elapsed.
Step_08b_WT_ND_M2.o5824808:0 hours, 32 minutes and 10 seconds elapsed.
Step_08b_WT_ND_M2.o5824810:0 hours, 29 minutes and 6 seconds elapsed.
Step_08b_WT_ND_M2.o5824812:0 hours, 32 minutes and 44 seconds elapsed.
Step_08b_WT_ND_M2.o5824814:0 hours, 31 minutes and 7 seconds elapsed.
Step_08b_WT_ND_M3.o5824816:0 hours, 24 minutes and 42 seconds elapsed.
Step_08b_WT_ND_M3.o5824818:0 hours, 32 minutes and 4 seconds elapsed.
Step_08b_WT_ND_M3.o5824820:0 hours, 39 minutes and 30 seconds elapsed.
Step_08b_WT_ND_M3.o5824822:0 hours, 28 minutes and 40 seconds elapsed.
Step_08b_WT_ND_M3.o5824824:0 hours, 38 minutes and 20 seconds elapsed.
Step_08b_WT_ND_M3.o5824826:0 hours, 36 minutes and 32 seconds elapsed.
Step_08b_WT_ND_M3.o5824828:0 hours, 39 minutes and 5 seconds elapsed.
Step_08b_WT_ND_M3.o5824830:0 hours, 47 minutes and 39 seconds elapsed.
09a_DiffExp_1_HTSeq
Step_09a_DiffExp_1a.o5831410:6 minutes and 1 seconds elapsed.
Step_09a_DiffExp_1b.o5831411:3 minutes and 47 seconds elapsed.
Step_09a_DiffExp_1c.o5831412:5 minutes and 49 seconds elapsed.
09a_DiffExp_2_HTSeq
Step_09a_DiffExp_2a.o5830392:2 minutes and 47 seconds elapsed.
Step_09a_DiffExp_2b.o5830393:2 minutes and 14 seconds elapsed.
Step_09a_DiffExp_2c.o5830394:2 minutes and 44 seconds elapsed.
09b_DiffExp_1_featureCounts
Step_09b_DiffExp_2a.o5830402:2 minutes and 57 seconds elapsed.
Step_09b_DiffExp_2b.o5830403:2 minutes and 1 seconds elapsed.
Step_09b_DiffExp_2c.o5830404:2 minutes and 56 seconds elapsed.
09b_DiffExp_2_featureCounts
Step_09b_DiffExp_2a.o5830499:2 minutes and 51 seconds elapsed.
Step_09b_DiffExp_2b.o5830500:1 minutes and 44 seconds elapsed.
Step_09b_DiffExp_2c.o5830501:2 minutes and 33 seconds elapsed.
09c_DiffExp_1_lncRNA_featureCounts
Step_09c_DiffExp_1d.o5830507:1 minutes and 17 seconds elapsed.
Step_09c_DiffExp_1e.o5830508:1 minutes and 17 seconds elapsed.
Step_09c_DiffExp_1f.o5830509:1 minutes and 23 seconds elapsed.
Step_09c_DiffExp_1g.o5830510:1 minutes and 2 seconds elapsed.
09c_DiffExp_2_lncRNA_featureCounts
Step_09c_DiffExp_2d.o5830514:1 minutes and 17 seconds elapsed.
Step_09c_DiffExp_2e.o5830515:1 minutes and 18 seconds elapsed.
Step_09c_DiffExp_2f.o5830516:1 minutes and 15 seconds elapsed.
Step_09c_DiffExp_2g.o5830517:1 minutes and 8 seconds elapsed.
10_bamCorrelate
Step_10_bamCor_01.o5830636:0 hours, 0 minutes and 19 seconds elapsed.
Step_10_bamCor_02.o5830637:0 hours, 0 minutes and 49 seconds elapsed.
Step_10_bamCor_03.o5830638:0 hours, 0 minutes and 49 seconds elapsed.
Step_10_bamCor_04.o5830639:0 hours, 0 minutes and 49 seconds elapsed.
Step_10_bamCor_Full.o5830635:0 hours, 0 minutes and 18 seconds elapsed.
11_UCSC_BigWig
Step_11_Cyp2bnull_HFD_M1.o5830669:2 hours, 5 minutes and 44 seconds elapsed.
Step_11_Cyp2bnull_HFD_M2.o5830670:1 hours, 37 minutes and 10 seconds elapsed.
Step_11_Cyp2bnull_HFD_M3.o5830671:1 hours, 22 minutes and 7 seconds elapsed.
Step_11_Cyp2bnull_ND_M1.o5830663:1 hours, 44 minutes and 27 seconds elapsed.
Step_11_Cyp2bnull_ND_M2.o5830664:2 hours, 20 minutes and 29 seconds elapsed.
Step_11_Cyp2bnull_ND_M3.o5830665:1 hours, 54 minutes and 39 seconds elapsed.
Step_11_WT_HFD_M1.o5830666:1 hours, 55 minutes and 15 seconds elapsed.
Step_11_WT_HFD_M2.o5830667:1 hours, 7 minutes and 16 seconds elapsed.
Step_11_WT_HFD_M3.o5830668:3 hours, 2 minutes and 1 seconds elapsed.
Step_11_WT_ND_M1.o5830660:0 hours, 34 minutes and 57 seconds elapsed.
Step_11_WT_ND_M2.o5830661:1 hours, 59 minutes and 33 seconds elapsed.
Step_11_WT_ND_M3.o5830662:2 hours, 35 minutes and 47 seconds elapsed.
13a_Pearson_Correlation_HTSeq
13b_Pearson_Correlation_featureCounts
13c_Pearson_Correlation_lncRNA
14_final_summary
#--------------------------------------------------------------
03_Run_Pipeline.sh run time:
23 hours, 58 minutes and 47 seconds elapsed.
#--------------------------------------------------------------