Left reads: Input : 18262900 Mapped : 16682859 (91.3% of input) of these: 1038288 ( 6.2%) have multiple alignments (19715 have >20) Right reads: Input : 18262900 Mapped : 15250348 (83.5% of input) of these: 916651 ( 6.0%) have multiple alignments (19267 have >20) 87.4% overall read mapping rate. Aligned pairs: 14972920 of these: 887488 ( 5.9%) have multiple alignments 272885 ( 1.8%) are discordant alignments 80.5% concordant pair alignment rate.