Left reads: Input : 17319478 Mapped : 16549493 (95.6% of input) of these: 1309077 ( 7.9%) have multiple alignments (43839 have >20) Right reads: Input : 17319478 Mapped : 15434548 (89.1% of input) of these: 1193842 ( 7.7%) have multiple alignments (43409 have >20) 92.3% overall read mapping rate. Aligned pairs: 15187004 of these: 1165771 ( 7.7%) have multiple alignments 280190 ( 1.8%) are discordant alignments 86.1% concordant pair alignment rate.