Left reads: Input : 18088154 Mapped : 17181883 (95.0% of input) of these: 1347553 ( 7.8%) have multiple alignments (46965 have >20) Right reads: Input : 18088154 Mapped : 16168617 (89.4% of input) of these: 1243720 ( 7.7%) have multiple alignments (46711 have >20) 92.2% overall read mapping rate. Aligned pairs: 15906508 of these: 1212462 ( 7.6%) have multiple alignments 319253 ( 2.0%) are discordant alignments 86.2% concordant pair alignment rate.