Left reads: Input : 21582658 Mapped : 20456195 (94.8% of input) of these: 1668786 ( 8.2%) have multiple alignments (46212 have >20) Right reads: Input : 21582658 Mapped : 18895608 (87.5% of input) of these: 1506389 ( 8.0%) have multiple alignments (45734 have >20) 91.2% overall read mapping rate. Aligned pairs: 18570881 of these: 1463856 ( 7.9%) have multiple alignments 416666 ( 2.2%) are discordant alignments 84.1% concordant pair alignment rate.