Left reads: Input : 21309554 Mapped : 19735190 (92.6% of input) of these: 1728147 ( 8.8%) have multiple alignments (70951 have >20) Right reads: Input : 21309554 Mapped : 18094495 (84.9% of input) of these: 1545629 ( 8.5%) have multiple alignments (70469 have >20) 88.8% overall read mapping rate. Aligned pairs: 17757590 of these: 1501703 ( 8.5%) have multiple alignments 454962 ( 2.6%) are discordant alignments 81.2% concordant pair alignment rate.