Left reads: Input : 13432864 Mapped : 10287044 (76.6% of input) of these: 885998 ( 8.6%) have multiple alignments (29974 have >20) Right reads: Input : 13432864 Mapped : 9172885 (68.3% of input) of these: 766271 ( 8.4%) have multiple alignments (29542 have >20) 72.4% overall read mapping rate. Aligned pairs: 8935556 of these: 735820 ( 8.2%) have multiple alignments 131562 ( 1.5%) are discordant alignments 65.5% concordant pair alignment rate.