Left reads: Input : 65480436 Mapped : 56895131 (86.9% of input) of these: 6592363 (11.6%) have multiple alignments (961506 have >20) Right reads: Input : 65480436 Mapped : 55489358 (84.7% of input) of these: 6430596 (11.6%) have multiple alignments (962191 have >20) 85.8% overall read mapping rate. Aligned pairs: 53659977 of these: 6196439 (11.5%) have multiple alignments 392597 ( 0.7%) are discordant alignments 81.3% concordant pair alignment rate.