Left reads: Input : 127166234 Mapped : 118997663 (93.6% of input) of these: 16369588 (13.8%) have multiple alignments (2815479 have >20) Right reads: Input : 127166234 Mapped : 117071105 (92.1% of input) of these: 16128222 (13.8%) have multiple alignments (2806678 have >20) 92.8% overall read mapping rate. Aligned pairs: 114522141 of these: 15716159 (13.7%) have multiple alignments 1964589 ( 1.7%) are discordant alignments 88.5% concordant pair alignment rate.