FastQCFastQC Report
Thu 19 Nov 2020
TCDD_M_A9_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameTCDD_M_A9_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31475018
Sequences flagged as poor quality0
Sequence length51
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCTC1435470.45606645880234287No Hit
CCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGT1152840.36627143469782925No Hit
TCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAG759520.24130883737699532No Hit
CACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTA377840.12004441109453855No Hit
GATCTGCCCAGGAGACACCAGCAGGATGAAGCTACTCACCAGCCTGGTCTT365890.11624774924672006No Hit
CTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTA365260.11604759050495221No Hit
CTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCTCG342360.10877197909783562No Hit
GGAGTCTAACGCGTGCGCGAGTCAGGGGCTCGTCCGAAAGCCGCCGTGGCG326520.10373941644767287No Hit
GCCACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCC322710.10252893262841026No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.7)