FastQCFastQC Report
Thu 19 Nov 2020
TCDD_M_A7_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameTCDD_M_A7_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67445953
Sequences flagged as poor quality0
Sequence length51
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCTC1593800.23630772924210885No Hit
CCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGT1325460.1965217987208217No Hit
CACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTA969680.14377141353462675No Hit
TCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAG813650.12063733460775622No Hit
CCACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCT721400.10695971632278664No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.7)