FastQCFastQC Report
Wed 3 Mar 2021
TC3_D6_fPM_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameTC3_D6_fPM_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences47751478
Sequences flagged as poor quality0
Sequence length101
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCACTAGCCTCTGGCAAAATGAAGTGGGTAACCTTTCTCCTCCTCCTC1007690.2110280230488363No Hit
CAACATTTCAAAGGCCTAGTCCTGATTGCCTTTTCCCAGTATCTCCAGAA536810.11241746276418922No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG489280.10246384415577671No Hit
CACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCT486080.10179370783036286No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)