FastQCFastQC Report
Mon 8 Mar 2021
TC8_C6_fCTRL_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameTC8_C6_fCTRL_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences50210632
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAGAGCTCCGGGGAGGTCACCCACACCCTTCAGGATGAAAGCTGTGGT1519200.3025654008895965No Hit
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT747350.1488429781166666No Hit
CCCCACTAGCCTCTGGCAAAATGAAGTGGGTAACCTTTCTCCTCCTCCTC701470.13970547114403978No Hit
CCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAG662640.13197204926637848No Hit
CTTAGATCCAGGGTGCCCCTCCAACCAGGATGAGGCTCTTCATCGCTCTT560830.111695467207025No Hit
CAAGCTCCTGACAGGATGGCTTCCCTTCGACTCTTCCTCCTTTGCCTCGC506440.10086310007012061No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)