FastQCFastQC Report
Mon 8 Mar 2021
TC8_C2_fCTRL_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameTC8_C2_fCTRL_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14459407
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT638060.44127674115542914No Hit
CCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAG210580.14563529472543377No Hit
CTTGGAGGTCCCGTGGATCTGTGTCTTGCTTCAACAGTGTTTGAACGGAA197020.13625731677654554No Hit
CTGGAGGCTAAGGACTTGTTTCGGAAGGAGCTGACTGGCCAATCACAATT176670.12218343394027155No Hit
CGTGGATCTGTGTCTTGCTTCAACAGTGTTTGAACGGAACAGACCCGGGG165060.11415405901500664No Hit
CTGTTATCTTCATTAATATTTTATTATCCCTAACGCTAATTCTAGTTGCA159510.11031572733238644No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)