FastQCFastQC Report
Mon 11 Jan 2021
G119-M14_ATTCCT-_AC6PMVANXX_L004_001.R_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG119-M14_ATTCCT-_AC6PMVANXX_L004_001.R_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19544546
Sequences flagged as poor quality0
Sequence length125
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTGCGGCGGCCTCCACCCGGGCCCGCGCCCTAGGCTTCAAGGCTCACCG364840.18667100274419268No Hit
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG314200.1607609611397471Illumina Single End PCR Primer 1 (100% over 50bp)
AGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGTGGCTCGCCTCGCG262480.13429833570961433No Hit
CCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAG204540.10465323676487548No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)