FastQCFastQC Report
Mon 6 Mar 2017
G151-M25-Index-11_GGCTAC-_BCALRAANXX_L005_001.R1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG151-M25-Index-11_GGCTAC-_BCALRAANXX_L005_001.R1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24281262
Sequences flagged as poor quality0
Sequence length50
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGCTAC17400.027.5563333
TCTCGTA16400.027.35912741
ACGGCTA17500.027.14755232
CTCGTAT17650.026.41821742
TCGTATG17950.026.22169343
CGTATGC18600.025.30445944
GATCGGA21200.022.325471
CGTCTGA21650.022.1578416
TCACGGC23500.020.7775730
GTCACGG23900.020.61358329
ATCGGAA23450.020.260372
ACACGTC24000.019.8965713
ATCTCGT23350.019.87519840
CACGGCT25850.018.88893331
AGTCACG25800.018.66971228
ACGTCTG25650.018.6167515
CATCTCG26000.017.34174539
TCGGAAG28250.017.0497973
CGGAAGA30600.015.8859644
CACGTCT33650.014.64854414
Produced by FastQC (version 0.11.2)