G121-M6_GCCAAT-_BC7MKJANXX_L007_001.R1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	G121-M6_GCCAAT-_BC7MKJANXX_L007_001.R1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	26031400
Sequences flagged as poor quality	0
Sequence length	50
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGCCAATATCTCGTATGC	892049	3.426819149181373	TruSeq Adapter, Index 6 (100% over 50bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GATCGGA	107495	43.491405	1
ATCGGAA	107705	43.247276	2
TCGGAAG	108985	42.8197	3
CGTCTGA	109380	42.799618	16
ACACGTC	109745	42.769875	13
ACGTCTG	109910	42.65137	15
CGGAAGA	109385	42.643906	4
CGCCAAT	105780	42.559536	33
CGTATGC	107895	42.479588	44
GTCACGC	108090	42.459282	29
CACGTCT	110670	42.388374	14
TATCTCG	99430	42.38565	39
ACGCCAA	106795	42.371815	32
TCTCGTA	100515	42.301395	41
TCGTATG	108395	42.292404	43
CTCGTAT	106635	42.263535	42
AGTCACG	109290	42.241478	28
TCACGCC	108425	42.22182	30
CACACGT	111660	42.121178	12
ATCTCGT	100770	42.11143	40