# DREME 4.10.0 # command: dreme -v 1 -oc Static_Sex-independent_Output/dreme_out -p Static_Sex-independent_Output/seqs-centered -n Static_Sex-independent_Output/seqs-shuffled -png # host: scc-ph5 # when: Wed Jun 07 10:49:33 EDT 2017 # positives: 67058 # from: Static_Sex-independent_Output/seqs-centered (Wed Jun 07 10:47:11 EDT 2017) # negatives: 67058 # from: Static_Sex-independent_Output/seqs-shuffled (Wed Jun 07 10:47:52 EDT 2017) MEME version 4.10.0 ALPHABET= ACGT strands: + - Background letter frequencies (from dataset): A 0.231 C 0.269 G 0.269 T 0.231 MOTIF VGGAAR DREME # Word RC Word Pos Neg P-value E-value # BEST VGGAAR YTTCCB 27578 19589 1.5e-457 7.0e-453 # AGGAAG CTTCCT 10029 5685 2.3e-301 1.1e-296 # AGGAAA TTTCCT 7421 4347 1.2e-195 5.6e-191 # GGGAAA TTTCCC 5489 3931 1.0e-062 4.8e-058 # GGGAAG CTTCCC 7454 5694 3.8e-059 1.8e-054 # CGGAAG CTTCCG 2853 1834 1.9e-052 8.9e-048 # CGGAAA TTTCCG 1499 1084 8.4e-017 3.9e-012 letter-probability matrix: alength= 4 w= 6 nsites= 37163 E= 7.0e-453 0.511880 0.123591 0.364529 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.405807 0.000000 0.594193 0.000000 MOTIF RTAAAYA DREME # Word RC Word Pos Neg P-value E-value # BEST RTAAAYA TRTTTAY 3874 1234 2.6e-325 1.2e-320 # GTAAACA TGTTTAC 1438 426 6.6e-130 3.0e-125 # ATAAACA TGTTTAT 1178 418 5.4e-085 2.5e-080 # GTAAATA TATTTAC 757 213 7.9e-073 3.6e-068 # ATAAATA TATTTAT 668 197 2.9e-061 1.3e-056 letter-probability matrix: alength= 4 w= 7 nsites= 4080 E= 1.2e-320 0.459314 0.000000 0.540686 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.650000 0.000000 0.350000 1.000000 0.000000 0.000000 0.000000 MOTIF RAGKTCA DREME # Word RC Word Pos Neg P-value E-value # BEST RAGKTCA TGAMCTY 7712 4094 1.9e-270 8.8e-266 # AAGGTCA TGACCTT 2644 1084 1.3e-152 6.0e-148 # GAGGTCA TGACCTC 2529 1207 5.0e-109 2.3e-104 # AAGTTCA TGAACTT 1519 919 4.3e-035 1.9e-030 # GAGTTCA TGAACTC 1490 982 2.6e-025 1.2e-020 letter-probability matrix: alength= 4 w= 7 nsites= 8348 E= 8.8e-266 0.502875 0.000000 0.497125 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.637758 0.362242 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CYCCDCCC DREME # Word RC Word Pos Neg P-value E-value # BEST CYCCDCCC GGGHGGRG 7049 3822 5.1e-232 2.3e-227 # CCCCGCCC GGGCGGGG 1792 641 1.5e-127 6.7e-123 # CCCCACCC GGGTGGGG 1497 686 2.7e-070 1.2e-065 # CTCCGCCC GGGCGGAG 824 363 2.4e-042 1.1e-037 # CTCCTCCC GGGAGGAG 1453 817 5.2e-042 2.3e-037 # CCCCTCCC GGGAGGGG 1648 999 1.0e-037 4.5e-033 # CTCCACCC GGGTGGAG 856 596 3.6e-012 1.6e-007 letter-probability matrix: alength= 4 w= 8 nsites= 8350 E= 2.3e-227 0.000000 1.000000 0.000000 0.000000 0.000000 0.615449 0.000000 0.384551 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.283353 0.000000 0.337126 0.379521 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF WGCCAR DREME # Word RC Word Pos Neg P-value E-value # BEST WGCCAR YTGGCW 27009 22144 9.4e-168 4.2e-163 # TGCCAA TTGGCA 7110 5151 2.0e-077 9.2e-073 # AGCCAG CTGGCT 10050 7816 1.9e-072 8.3e-068 # AGCCAA TTGGCT 6838 5134 2.8e-060 1.3e-055 # TGCCAG CTGGCA 8862 7459 5.3e-032 2.4e-027 letter-probability matrix: alength= 4 w= 6 nsites= 35197 E= 4.2e-163 0.512515 0.000000 0.000000 0.487485 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.419524 0.000000 0.580476 0.000000 MOTIF ACACRB DREME # Word RC Word Pos Neg P-value E-value # BEST ACACRB VYGTGT 17088 13032 8.5e-156 3.8e-151 # ACACAG CTGTGT 7564 5458 1.4e-084 6.4e-080 # ACACAC GTGTGT 5575 4138 3.5e-052 1.6e-047 # ACACGT ACGTGT 1387 783 1.0e-039 4.7e-035 # ACACAT ATGTGT 3595 2916 3.3e-018 1.5e-013 # ACACGG CCGTGT 1571 1144 6.4e-017 2.9e-012 # ACACGC GCGTGT 1556 1244 1.4e-009 6.2e-005 letter-probability matrix: alength= 4 w= 6 nsites= 22534 E= 3.8e-151 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.806603 0.000000 0.193397 0.000000 0.000000 0.370507 0.408804 0.220689 MOTIF CHGGRA DREME # Word RC Word Pos Neg P-value E-value # BEST CHGGRA TYCCDG 21067 17122 2.5e-126 1.1e-121 # CTGGAA TTCCAG 6581 4828 1.9e-066 8.4e-062 # CTGGGA TCCCAG 6578 5203 1.8e-040 7.8e-036 # CAGGAA TTCCTG 2720 1928 1.3e-032 5.6e-028 # CCGGGA TCCCGG 2332 1683 1.2e-025 5.2e-021 # CAGGGA TCCCTG 5597 5062 3.5e-008 1.5e-003 # CCGGAA TTCCGG 675 509 7.0e-007 3.1e-002 letter-probability matrix: alength= 4 w= 6 nsites= 25209 E= 1.1e-121 0.000000 1.000000 0.000000 0.000000 0.336110 0.121861 0.000000 0.542029 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.403745 0.000000 0.596255 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF AGRDGGCG DREME # Word RC Word Pos Neg P-value E-value # BEST AGRDGGCG CGCCHYCT 2301 1039 4.2e-111 1.9e-106 # AGGTGGCG CGCCACCT 430 152 3.9e-032 1.7e-027 # AGATGGCG CGCCATCT 316 93 7.0e-030 3.1e-025 # AGGGGGCG CGCCCCCT 557 262 1.0e-025 4.4e-021 # AGAGGGCG CGCCCTCT 482 220 8.0e-024 3.5e-019 # AGGAGGCG CGCCTCCT 393 201 1.2e-015 5.1e-011 # AGAAGGCG CGCCTTCT 174 123 1.8e-003 7.9e+001 letter-probability matrix: alength= 4 w= 8 nsites= 2373 E= 1.9e-106 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.410029 0.000000 0.589971 0.000000 0.240624 0.000000 0.443321 0.316056 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF ARCAAAYA DREME # Word RC Word Pos Neg P-value E-value # BEST ARCAAAYA TRTTTGYT 1906 845 2.5e-095 1.1e-090 # AACAAACA TGTTTGTT 735 239 5.4e-060 2.4e-055 # AGCAAACA TGTTTGCT 725 362 4.5e-029 2.0e-024 # AACAAATA TATTTGTT 264 127 1.7e-012 7.5e-008 # AGCAAATA TATTTGCT 251 127 8.2e-011 3.6e-006 letter-probability matrix: alength= 4 w= 8 nsites= 1998 E= 1.1e-090 1.000000 0.000000 0.000000 0.000000 0.512012 0.000000 0.487988 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.744745 0.000000 0.255255 1.000000 0.000000 0.000000 0.000000 MOTIF TTATYW DREME # Word RC Word Pos Neg P-value E-value # BEST TTATYW WRATAA 6982 4893 2.6e-090 1.1e-085 # TTATCT AGATAA 2418 1426 4.4e-060 1.9e-055 # TTATTT AAATAA 1968 1360 6.1e-027 2.6e-022 # TTATTA TAATAA 1245 908 1.3e-013 5.6e-009 # TTATCA TGATAA 1916 1504 5.1e-013 2.2e-008 letter-probability matrix: alength= 4 w= 6 nsites= 7676 E= 1.1e-085 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.575951 0.000000 0.424049 0.414148 0.000000 0.000000 0.585852 MOTIF AGGHCA DREME # Word RC Word Pos Neg P-value E-value # BEST AGGHCA TGDCCT 14124 11345 9.1e-084 4.0e-079 # AGGCCA TGGCCT 7273 5793 1.3e-042 5.6e-038 # AGGACA TGTCCT 5239 4151 1.2e-031 5.3e-027 # AGGTCA TGACCT 2774 2100 4.0e-023 1.7e-018 letter-probability matrix: alength= 4 w= 6 nsites= 16162 E= 4.0e-079 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.342037 0.479705 0.000000 0.178258 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CACGTG DREME # Word RC Word Pos Neg P-value E-value # BEST CACGTG CACGTG 1162 434 6.9e-078 3.0e-073 # CACGTG CACGTG 1162 434 6.9e-078 3.0e-073 letter-probability matrix: alength= 4 w= 6 nsites= 1203 E= 3.0e-073 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 MOTIF CYGCCDCC DREME # Word RC Word Pos Neg P-value E-value # BEST CYGCCDCC GGHGGCRG 3631 2231 6.4e-079 2.8e-074 # CCGCCGCC GGCGGCGG 926 403 1.8e-048 7.7e-044 # CCGCCTCC GGAGGCGG 509 248 5.2e-022 2.3e-017 # CTGCCTCC GGAGGCAG 919 609 7.5e-016 3.2e-011 # CTGCCACC GGTGGCAG 856 564 3.3e-015 1.4e-010 # CCGCCACC GGTGGCGG 341 187 9.2e-012 4.0e-007 # CTGCCGCC GGCGGCAG 471 324 9.6e-008 4.1e-003 letter-probability matrix: alength= 4 w= 8 nsites= 4068 E= 2.8e-074 0.000000 1.000000 0.000000 0.000000 0.000000 0.453048 0.000000 0.546952 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.291052 0.000000 0.359390 0.349558 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF AATCAWTA DREME # Word RC Word Pos Neg P-value E-value # BEST AATCAWTA TAWTGATT 600 132 9.9e-073 4.2e-068 # AATCAATA TATTGATT 320 72 8.2e-039 3.5e-034 # AATCATTA TAATGATT 280 60 1.7e-035 7.4e-031 letter-probability matrix: alength= 4 w= 8 nsites= 602 E= 4.2e-068 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.533223 0.000000 0.000000 0.466777 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CARAGTCC DREME # Word RC Word Pos Neg P-value E-value # BEST CARAGTCC GGACTYTG 1345 575 3.9e-072 1.6e-067 # CAAAGTCC GGACTTTG 753 224 3.3e-068 1.4e-063 # CAGAGTCC GGACTCTG 598 352 5.2e-016 2.2e-011 letter-probability matrix: alength= 4 w= 8 nsites= 1359 E= 1.6e-067 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.557027 0.000000 0.442973 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF TTAYRYAA DREME # Word RC Word Pos Neg P-value E-value # BEST TTAYRYAA TTRYRTAA 1123 453 9.3e-067 4.0e-062 # TTACATAA TTATGTAA 275 67 2.0e-031 8.7e-027 # TTATGCAA TTGCATAA 279 114 2.0e-017 8.7e-013 # TTACACAA TTGTGTAA 311 153 8.4e-014 3.6e-009 # TTATATAA TTATATAA 60 16 1.9e-007 8.2e-003 # TTACGCAA TTGCGTAA 92 36 3.9e-007 1.7e-002 # TTACGTAA TTACGTAA 40 11 2.8e-005 1.2e+000 # TTATACAA TTGTATAA 89 57 5.0e-003 2.1e+002 letter-probability matrix: alength= 4 w= 8 nsites= 1154 E= 4.0e-062 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.520797 0.000000 0.479203 0.535529 0.000000 0.464471 0.000000 0.000000 0.668977 0.000000 0.331023 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF AAARMAAA DREME # Word RC Word Pos Neg P-value E-value # BEST AAARMAAA TTTKYTTT 2184 1368 2.4e-044 1.0e-039 # AAAAAAAA TTTTTTTT 834 473 3.7e-024 1.6e-019 # AAAACAAA TTTGTTTT 634 341 1.6e-021 6.8e-017 # AAAGAAAA TTTTCTTT 495 366 5.8e-006 2.5e-001 # AAAGCAAA TTTGCTTT 411 303 2.9e-005 1.2e+000 letter-probability matrix: alength= 4 w= 8 nsites= 2569 E= 1.0e-039 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.653562 0.000000 0.346438 0.000000 0.583885 0.416115 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF TGACGTMA DREME # Word RC Word Pos Neg P-value E-value # BEST TGACGTMA TKACGTCA 295 53 3.1e-042 1.3e-037 # TGACGTCA TGACGTCA 225 31 7.2e-038 3.1e-033 # TGACGTAA TTACGTCA 72 22 1.1e-007 4.8e-003 letter-probability matrix: alength= 4 w= 8 nsites= 300 E= 1.3e-037 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.240000 0.760000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF RGAAAB DREME # Word RC Word Pos Neg P-value E-value # BEST RGAAAB VTTTCY 12297 10522 2.3e-038 1.0e-033 # GGAAAC GTTTCC 903 598 1.2e-015 5.2e-011 # AGAAAC GTTTCT 3420 2861 2.7e-013 1.1e-008 # GGAAAT ATTTCC 694 457 1.2e-012 5.1e-008 # GGAAAG CTTTCC 1152 888 2.1e-009 9.0e-005 # AGAAAG CTTTCT 4700 4247 3.8e-007 1.6e-002 # AGAAAT ATTTCT 2542 2209 4.6e-007 2.0e-002 letter-probability matrix: alength= 4 w= 6 nsites= 13721 E= 1.0e-033 0.798484 0.000000 0.201516 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.321624 0.437286 0.241090 MOTIF GGGMGGGA DREME # Word RC Word Pos Neg P-value E-value # BEST GGGMGGGA TCCCKCCC 1079 565 5.2e-038 2.2e-033 # GGGAGGGA TCCCTCCC 679 364 4.0e-023 1.7e-018 # GGGCGGGA TCCCGCCC 412 204 1.6e-017 6.7e-013 letter-probability matrix: alength= 4 w= 8 nsites= 1132 E= 2.2e-033 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.630742 0.369258 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF ARAGGGCA DREME # Word RC Word Pos Neg P-value E-value # BEST ARAGGGCA TGCCCTYT 1417 840 4.9e-035 2.1e-030 # AGAGGGCA TGCCCTCT 924 564 2.6e-021 1.1e-016 # AAAGGGCA TGCCCTTT 504 277 1.6e-016 6.7e-012 letter-probability matrix: alength= 4 w= 8 nsites= 1453 E= 2.1e-030 1.000000 0.000000 0.000000 0.000000 0.353063 0.000000 0.646937 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CASAGM DREME # Word RC Word Pos Neg P-value E-value # BEST CASAGM KCTSTG 19199 17313 3.1e-031 1.3e-026 # CAGAGC GCTCTG 6768 5931 3.1e-015 1.3e-010 # CAGAGA TCTCTG 5920 5281 1.5e-010 6.4e-006 # CACAGC GCTGTG 5335 4803 2.1e-008 8.7e-004 # CACAGA TCTGTG 4508 4023 3.0e-008 1.3e-003 letter-probability matrix: alength= 4 w= 6 nsites= 22590 E= 1.3e-026 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.431784 0.568216 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.450730 0.549270 0.000000 0.000000 MOTIF AAATAY DREME # Word RC Word Pos Neg P-value E-value # BEST AAATAY RTATTT 2201 1525 1.2e-029 5.2e-025 # AAATAT ATATTT 1111 710 1.3e-021 5.6e-017 # AAATAC GTATTT 1130 837 1.5e-011 6.4e-007 letter-probability matrix: alength= 4 w= 6 nsites= 2281 E= 5.2e-025 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.502850 0.000000 0.497150 MOTIF CCACRYCC DREME # Word RC Word Pos Neg P-value E-value # BEST CCACRYCC GGRYGTGG 1605 1015 9.1e-032 3.8e-027 # CCACGCCC GGGCGTGG 500 229 1.7e-024 7.2e-020 # CCACACCC GGGTGTGG 634 448 7.6e-009 3.2e-004 # CCACATCC GGATGTGG 348 254 7.1e-005 3.0e+000 # CCACGTCC GGACGTGG 144 89 1.9e-004 7.9e+000 letter-probability matrix: alength= 4 w= 8 nsites= 1659 E= 3.8e-027 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.599759 0.000000 0.400241 0.000000 0.000000 0.702833 0.000000 0.297167 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF GCVTGCGY DREME # Word RC Word Pos Neg P-value E-value # BEST GCVTGCGY RCGCABGC 1267 779 5.7e-028 2.4e-023 # GCATGCGC GCGCATGC 280 125 4.3e-015 1.8e-010 # GCATGCGT ACGCATGC 134 52 7.6e-010 3.2e-005 # GCGTGCGC GCGCACGC 269 153 8.4e-009 3.5e-004 # GCCTGCGC GCGCAGGC 431 318 2.0e-005 8.3e-001 # GCGTGCGT ACGCACGC 88 41 2.1e-005 8.9e-001 # GCCTGCGT ACGCAGGC 172 110 1.3e-004 5.5e+000 letter-probability matrix: alength= 4 w= 8 nsites= 1339 E= 2.4e-023 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.281553 0.455564 0.262883 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.721434 0.000000 0.278566 MOTIF GTSACAK DREME # Word RC Word Pos Neg P-value E-value # BEST GTSACAK MTGTSAC 3341 2571 6.4e-025 2.7e-020 # GTCACAT ATGTGAC 862 554 9.1e-017 3.8e-012 # GTGACAG CTGTCAC 1345 1071 1.0e-008 4.2e-004 # GTGACAT ATGTCAC 835 635 8.6e-008 3.6e-003 # GTCACAG CTGTGAC 690 533 3.6e-006 1.5e-001 letter-probability matrix: alength= 4 w= 7 nsites= 3481 E= 2.7e-020 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.409078 0.590922 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.548118 0.451882 MOTIF TTTAWW DREME # Word RC Word Pos Neg P-value E-value # BEST TTTAWW WWTAAA 4447 3578 7.5e-024 3.1e-019 # TTTAAA TTTAAA 1355 993 2.5e-014 1.1e-009 # TTTATT AATAAA 929 695 2.8e-009 1.2e-004 # TTTATA TATAAA 931 731 4.4e-007 1.8e-002 # TTTAAT ATTAAA 1456 1315 3.6e-003 1.5e+002 letter-probability matrix: alength= 4 w= 6 nsites= 4757 E= 3.1e-019 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.603952 0.000000 0.000000 0.396048 0.489384 0.000000 0.000000 0.510616 MOTIF CSTCCTCC DREME # Word RC Word Pos Neg P-value E-value # BEST CSTCCTCC GGAGGASG 816 480 2.6e-021 1.1e-016 # CCTCCTCC GGAGGAGG 652 362 2.3e-020 9.6e-016 # CGTCCTCC GGAGGACG 180 122 5.0e-004 2.1e+001 letter-probability matrix: alength= 4 w= 8 nsites= 901 E= 1.1e-016 0.000000 1.000000 0.000000 0.000000 0.000000 0.801332 0.198668 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CAAAGGTY DREME # Word RC Word Pos Neg P-value E-value # BEST CAAAGGTY RACCTTTG 643 358 5.9e-020 2.5e-015 # CAAAGGTC GACCTTTG 298 150 1.1e-012 4.6e-008 # CAAAGGTT AACCTTTG 348 208 1.4e-009 6.0e-005 letter-probability matrix: alength= 4 w= 8 nsites= 650 E= 2.5e-015 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.461538 0.000000 0.538462 MOTIF CAGGMTG DREME # Word RC Word Pos Neg P-value E-value # BEST CAGGMTG CAKCCTG 3664 2951 1.3e-019 5.3e-015 # CAGGCTG CAGCCTG 2352 1924 1.5e-011 6.5e-007 # CAGGATG CATCCTG 1351 1057 8.1e-010 3.4e-005 letter-probability matrix: alength= 4 w= 7 nsites= 3778 E= 5.3e-015 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.363949 0.636051 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 MOTIF GCDGCMGC DREME # Word RC Word Pos Neg P-value E-value # BEST GCDGCMGC GCKGCHGC 2080 1528 6.0e-021 2.5e-016 # GCAGCAGC GCTGCTGC 902 648 4.7e-011 1.9e-006 # GCAGCCGC GCGGCTGC 433 293 1.1e-007 4.4e-003 # GCGGCCGC GCGGCCGC 295 191 1.3e-006 5.5e-002 # GCTGCAGC GCTGCAGC 392 289 4.3e-005 1.8e+000 # GCGGCAGC GCTGCCGC 242 191 8.0e-003 3.3e+002 letter-probability matrix: alength= 4 w= 8 nsites= 2210 E= 2.5e-016 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.601357 0.000000 0.196380 0.202262 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.632127 0.367873 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CTGAGYCA DREME # Word RC Word Pos Neg P-value E-value # BEST CTGAGYCA TGRCTCAG 902 554 2.0e-020 8.4e-016 # CTGAGCCA TGGCTCAG 383 207 1.7e-013 7.3e-009 # CTGAGTCA TGACTCAG 521 348 2.1e-009 8.9e-005 letter-probability matrix: alength= 4 w= 8 nsites= 918 E= 8.4e-016 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.422658 0.000000 0.577342 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CTGTAAYY DREME # Word RC Word Pos Neg P-value E-value # BEST CTGTAAYY RRTTACAG 697 411 2.7e-018 1.1e-013 # CTGTAACT AGTTACAG 220 124 1.2e-007 5.1e-003 # CTGTAATT AATTACAG 139 70 1.0e-006 4.3e-002 # CTGTAATC GATTACAG 148 81 5.5e-006 2.3e-001 # CTGTAACC GGTTACAG 195 136 6.9e-004 2.9e+001 letter-probability matrix: alength= 4 w= 8 nsites= 706 E= 1.1e-013 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.593484 0.000000 0.406516 0.000000 0.488669 0.000000 0.511331 MOTIF STGGCCA DREME # Word RC Word Pos Neg P-value E-value # BEST STGGCCA TGGCCAS 2781 2188 5.3e-018 2.2e-013 # GTGGCCA TGGCCAC 1466 1106 4.1e-013 1.7e-008 # CTGGCCA TGGCCAG 1915 1528 1.3e-011 5.3e-007 letter-probability matrix: alength= 4 w= 7 nsites= 2855 E= 2.2e-013 0.000000 0.589842 0.410158 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF MCGTGR DREME # Word RC Word Pos Neg P-value E-value # BEST MCGTGR YCACGK 4539 3818 2.0e-016 8.3e-012 # CCGTGG CCACGG 2028 1729 4.0e-007 1.7e-002 # ACGTGA TCACGT 632 480 2.6e-006 1.1e-001 # ACGTGG CCACGT 770 610 8.3e-006 3.4e-001 # CCGTGA TCACGG 1235 1116 7.0e-003 2.9e+002 letter-probability matrix: alength= 4 w= 6 nsites= 4752 E= 8.3e-012 0.297980 0.702020 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.396886 0.000000 0.603114 0.000000 MOTIF CTTTRMCC DREME # Word RC Word Pos Neg P-value E-value # BEST CTTTRMCC GGKYAAAG 1103 746 3.1e-017 1.3e-012 # CTTTAACC GGTTAAAG 209 114 6.7e-008 2.8e-003 # CTTTACCC GGGTAAAG 210 130 8.2e-006 3.4e-001 # CTTTGACC GGTCAAAG 242 161 3.1e-005 1.3e+000 # CTTTGCCC GGGCAAAG 449 341 6.6e-005 2.7e+000 letter-probability matrix: alength= 4 w= 8 nsites= 1117 E= 1.3e-012 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.376902 0.000000 0.623098 0.000000 0.406446 0.593554 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF GATCAATA DREME # Word RC Word Pos Neg P-value E-value # BEST GATCAATA TATTGATC 172 56 3.1e-015 1.3e-010 # GATCAATA TATTGATC 172 56 3.1e-015 1.3e-010 letter-probability matrix: alength= 4 w= 8 nsites= 173 E= 1.3e-010 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 MOTIF ATGGCGKC DREME # Word RC Word Pos Neg P-value E-value # BEST ATGGCGKC GMCGCCAT 216 83 3.8e-015 1.6e-010 # ATGGCGGC GCCGCCAT 139 43 2.6e-013 1.1e-008 # ATGGCGTC GACGCCAT 77 40 4.0e-004 1.6e+001 letter-probability matrix: alength= 4 w= 8 nsites= 216 E= 1.6e-010 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.643519 0.356481 0.000000 1.000000 0.000000 0.000000 MOTIF CCBGCCTC DREME # Word RC Word Pos Neg P-value E-value # BEST CCBGCCTC GAGGCVGG 1116 783 7.2e-015 3.0e-010 # CCCGCCTC GAGGCGGG 348 192 8.5e-012 3.5e-007 # CCTGCCTC GAGGCAGG 480 372 1.2e-004 4.8e+000 # CCGGCCTC GAGGCCGG 299 226 8.1e-004 3.3e+001 letter-probability matrix: alength= 4 w= 8 nsites= 1139 E= 3.0e-010 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.309921 0.264267 0.425812 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CTGGGYW DREME # Word RC Word Pos Neg P-value E-value # BEST CTGGGYW WRCCCAG 5787 5051 8.8e-014 3.6e-009 # CTGGGCT AGCCCAG 2070 1763 2.6e-007 1.1e-002 # CTGGGTA TACCCAG 745 596 2.4e-005 9.9e-001 # CTGGGCA TGCCCAG 2082 1848 8.1e-005 3.3e+000 # CTGGGTT AACCCAG 1109 987 3.9e-003 1.6e+002 letter-probability matrix: alength= 4 w= 7 nsites= 6121 E= 3.6e-009 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.694331 0.000000 0.305669 0.472472 0.000000 0.000000 0.527528 MOTIF TTGTGMAA DREME # Word RC Word Pos Neg P-value E-value # BEST TTGTGMAA TTKCACAA 831 560 1.4e-013 5.9e-009 # TTGTGCAA TTGCACAA 456 302 1.1e-008 4.6e-004 # TTGTGAAA TTTCACAA 380 258 7.3e-007 3.0e-002 letter-probability matrix: alength= 4 w= 8 nsites= 847 E= 5.9e-009 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.453365 0.546635 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CVGGGTCA DREME # Word RC Word Pos Neg P-value E-value # BEST CVGGGTCA TGACCCBG 733 482 2.4e-013 1.0e-008 # CAGGGTCA TGACCCTG 484 328 2.2e-008 9.2e-004 # CCGGGTCA TGACCCGG 127 64 3.0e-006 1.2e-001 # CGGGGTCA TGACCCCG 126 90 8.5e-003 3.5e+002 letter-probability matrix: alength= 4 w= 8 nsites= 743 E= 1.0e-008 0.000000 1.000000 0.000000 0.000000 0.659489 0.172275 0.168237 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF GTTAATBA DREME # Word RC Word Pos Neg P-value E-value # BEST GTTAATBA TVATTAAC 366 200 1.3e-012 5.3e-008 # GTTAATCA TGATTAAC 153 87 1.2e-005 4.9e-001 # GTTAATTA TAATTAAC 75 32 1.9e-005 8.0e-001 # GTTAATGA TCATTAAC 139 82 7.6e-005 3.1e+000 letter-probability matrix: alength= 4 w= 8 nsites= 368 E= 5.3e-008 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.415761 0.380435 0.203804 1.000000 0.000000 0.000000 0.000000 MOTIF CAGCHCCG DREME # Word RC Word Pos Neg P-value E-value # BEST CAGCHCCG CGGDGCTG 718 484 6.4e-012 2.6e-007 # CAGCTCCG CGGAGCTG 233 139 6.1e-007 2.5e-002 # CAGCACCG CGGTGCTG 183 113 2.8e-005 1.1e+000 # CAGCCCCG CGGGGCTG 306 235 1.3e-003 5.2e+001 letter-probability matrix: alength= 4 w= 8 nsites= 728 E= 2.6e-007 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.251374 0.428571 0.000000 0.320055 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF AAAGTMCA DREME # Word RC Word Pos Neg P-value E-value # BEST AAAGTMCA TGKACTTT 390 223 6.8e-012 2.8e-007 # AAAGTACA TGTACTTT 199 100 5.2e-009 2.1e-004 # AAAGTCCA TGGACTTT 193 125 8.0e-005 3.3e+000 letter-probability matrix: alength= 4 w= 8 nsites= 393 E= 2.8e-007 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.508906 0.491094 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CGGKGAC DREME # Word RC Word Pos Neg P-value E-value # BEST CGGKGAC GTCMCCG 952 683 1.2e-011 4.8e-007 # CGGGGAC GTCCCCG 665 463 8.4e-010 3.5e-005 # CGGTGAC GTCACCG 297 224 7.8e-004 3.2e+001 letter-probability matrix: alength= 4 w= 7 nsites= 981 E= 4.8e-007 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.695209 0.304791 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF AGRTGGCA DREME # Word RC Word Pos Neg P-value E-value # BEST AGRTGGCA TGCCAYCT 747 512 1.5e-011 6.2e-007 # AGATGGCA TGCCATCT 428 257 3.0e-011 1.2e-006 # AGGTGGCA TGCCACCT 323 255 2.6e-003 1.1e+002 letter-probability matrix: alength= 4 w= 8 nsites= 758 E= 6.2e-007 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.568602 0.000000 0.431398 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF AAACATTW DREME # Word RC Word Pos Neg P-value E-value # BEST AAACATTW WAATGTTT 262 131 1.7e-011 7.0e-007 # AAACATTA TAATGTTT 125 55 9.4e-008 3.9e-003 # AAACATTT AAATGTTT 137 76 1.7e-005 7.1e-001 letter-probability matrix: alength= 4 w= 8 nsites= 263 E= 7.0e-007 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.475285 0.000000 0.000000 0.524715 MOTIF ATKWCATC DREME # Word RC Word Pos Neg P-value E-value # BEST ATKWCATC GATGWMAT 553 357 3.7e-011 1.5e-006 # ATGACATC GATGTCAT 196 110 4.9e-007 2.0e-002 # ATTTCATC GATGAAAT 151 94 1.6e-004 6.7e+000 # ATGTCATC GATGACAT 172 116 5.7e-004 2.3e+001 # ATTACATC GATGTAAT 97 62 3.4e-003 1.4e+002 letter-probability matrix: alength= 4 w= 8 nsites= 559 E= 1.5e-006 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.556351 0.443649 0.470483 0.000000 0.000000 0.529517 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CCGBAGCC DREME # Word RC Word Pos Neg P-value E-value # BEST CCGBAGCC GGCTVCGG 624 418 8.0e-011 3.3e-006 # CCGCAGCC GGCTGCGG 289 188 2.1e-006 8.6e-002 # CCGGAGCC GGCTCCGG 269 192 1.9e-004 7.8e+000 # CCGTAGCC GGCTACGG 75 40 7.0e-004 2.9e+001 letter-probability matrix: alength= 4 w= 8 nsites= 640 E= 3.3e-006 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.453125 0.428125 0.118750 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF GCCATGK DREME # Word RC Word Pos Neg P-value E-value # BEST GCCATGK MCATGGC 1722 1377 1.9e-010 8.0e-006 # GCCATGG CCATGGC 1023 784 8.3e-009 3.4e-004 # GCCATGT ACATGGC 711 605 1.8e-003 7.4e+001 letter-probability matrix: alength= 4 w= 7 nsites= 1742 E= 8.0e-006 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.588404 0.411596 MOTIF TACADA DREME # Word RC Word Pos Neg P-value E-value # BEST TACADA THTGTA 4629 4067 2.4e-010 1.0e-005 # TACAAA TTTGTA 2074 1819 1.8e-005 7.4e-001 # TACAGA TCTGTA 1827 1612 1.1e-004 4.5e+000 # TACATA TATGTA 877 745 5.3e-004 2.2e+001 letter-probability matrix: alength= 4 w= 6 nsites= 4864 E= 1.0e-005 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.436472 0.000000 0.380140 0.183388 1.000000 0.000000 0.000000 0.000000 MOTIF GMAAACA DREME # Word RC Word Pos Neg P-value E-value # BEST GMAAACA TGTTTKC 1466 1159 7.8e-010 3.2e-005 # GAAAACA TGTTTTC 728 549 2.7e-007 1.1e-002 # GCAAACA TGTTTGC 751 615 1.2e-004 4.9e+000 letter-probability matrix: alength= 4 w= 7 nsites= 1498 E= 3.2e-005 0.000000 0.000000 1.000000 0.000000 0.491322 0.508678 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF AGGCDGAG DREME # Word RC Word Pos Neg P-value E-value # BEST AGGCDGAG CTCHGCCT 1059 808 2.7e-009 1.1e-004 # AGGCGGAG CTCCGCCT 257 164 3.3e-006 1.3e-001 # AGGCAGAG CTCTGCCT 359 273 3.4e-004 1.4e+001 # AGGCTGAG CTCAGCCT 448 379 8.8e-003 3.6e+002 letter-probability matrix: alength= 4 w= 8 nsites= 1063 E= 1.1e-004 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.337723 0.000000 0.240828 0.421449 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF ATCGATH DREME # Word RC Word Pos Neg P-value E-value # BEST ATCGATH DATCGAT 273 153 3.1e-009 1.3e-004 # ATCGATC GATCGAT 156 77 1.2e-007 5.0e-003 # ATCGATA TATCGAT 85 46 4.1e-004 1.7e+001 # ATCGATT AATCGAT 123 77 7.0e-004 2.8e+001 letter-probability matrix: alength= 4 w= 7 nsites= 276 E= 1.3e-004 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.202899 0.456522 0.000000 0.340580 MOTIF GCTGGRGA DREME # Word RC Word Pos Neg P-value E-value # BEST GCTGGRGA TCYCCAGC 1059 816 8.7e-009 3.6e-004 # GCTGGAGA TCTCCAGC 559 411 1.0e-006 4.2e-002 # GCTGGGGA TCCCCAGC 508 407 4.5e-004 1.8e+001 letter-probability matrix: alength= 4 w= 8 nsites= 1078 E= 3.6e-004 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.525046 0.000000 0.474954 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF TTAYGAAA DREME # Word RC Word Pos Neg P-value E-value # BEST TTAYGAAA TTTCRTAA 228 126 3.1e-008 1.3e-003 # TTACGAAA TTTCGTAA 66 23 2.8e-006 1.2e-001 # TTATGAAA TTTCATAA 163 103 1.4e-004 5.7e+000 letter-probability matrix: alength= 4 w= 8 nsites= 229 E= 1.3e-003 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.288210 0.000000 0.711790 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CCCGCCC DREME # Word RC Word Pos Neg P-value E-value # BEST CCCGCCC GGGCGGG 848 640 3.2e-008 1.3e-003 # CCCGCCC GGGCGGG 848 640 3.2e-008 1.3e-003 letter-probability matrix: alength= 4 w= 7 nsites= 903 E= 1.3e-003 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF TGKGGACA DREME # Word RC Word Pos Neg P-value E-value # BEST TGKGGACA TGTCCMCA 679 497 5.4e-008 2.2e-003 # TGGGGACA TGTCCCCA 400 271 3.4e-007 1.4e-002 # TGTGGACA TGTCCACA 280 226 9.1e-003 3.7e+002 letter-probability matrix: alength= 4 w= 8 nsites= 683 E= 2.2e-003 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.588580 0.411420 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CCABCTCC DREME # Word RC Word Pos Neg P-value E-value # BEST CCABCTCC GGAGVTGG 1152 920 1.5e-007 6.2e-003 # CCAGCTCC GGAGCTGG 399 316 1.0e-003 4.3e+001 # CCACCTCC GGAGGTGG 482 392 1.3e-003 5.1e+001 # CCATCTCC GGAGATGG 279 214 1.9e-003 7.8e+001 letter-probability matrix: alength= 4 w= 8 nsites= 1167 E= 6.2e-003 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.418166 0.342759 0.239075 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CCGVGTCC DREME # Word RC Word Pos Neg P-value E-value # BEST CCGVGTCC GGACBCGG 454 318 5.2e-007 2.1e-002 # CCGCGTCC GGACGCGG 157 103 4.8e-004 2.0e+001 # CCGAGTCC GGACTCGG 149 104 2.8e-003 1.1e+002 # CCGGGTCC GGACCCGG 152 111 6.7e-003 2.7e+002 letter-probability matrix: alength= 4 w= 8 nsites= 463 E= 2.1e-002 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.323974 0.343413 0.332613 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF TATTGACW DREME # Word RC Word Pos Neg P-value E-value # BEST TATTGACW WGTCAATA 253 155 6.8e-007 2.8e-002 # TATTGACT AGTCAATA 126 70 3.8e-005 1.6e+000 # TATTGACA TGTCAATA 127 86 3.0e-003 1.2e+002 letter-probability matrix: alength= 4 w= 8 nsites= 255 E= 2.8e-002 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.498039 0.000000 0.000000 0.501961 MOTIF GATGAYGA DREME # Word RC Word Pos Neg P-value E-value # BEST GATGAYGA TCRTCATC 217 127 6.8e-007 2.8e-002 # GATGATGA TCATCATC 157 95 5.6e-005 2.3e+000 # GATGACGA TCGTCATC 61 32 1.7e-003 7.0e+001 letter-probability matrix: alength= 4 w= 8 nsites= 222 E= 2.8e-002 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.274775 0.000000 0.725225 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 Time 18170.85 secs.