{ "report_data_sources": { "RSeQC": { "infer_experiment": { "G221_M78_Read_Strandness": "/projectnb/wax-es/zzhang/zz_G221/SAMPLES/G221_M78/Read_Strandness/G221_M78_Read_Strandness.txt", "G221_M75_Read_Strandness": "/projectnb/wax-es/zzhang/zz_G221/SAMPLES/G221_M75/Read_Strandness/G221_M75_Read_Strandness.txt", "G221_M73_Read_Strandness": "/projectnb/wax-es/zzhang/zz_G221/SAMPLES/G221_M73/Read_Strandness/G221_M73_Read_Strandness.txt", "G221_M70_Read_Strandness": "/projectnb/wax-es/zzhang/zz_G221/SAMPLES/G221_M70/Read_Strandness/G221_M70_Read_Strandness.txt", "G221_M76_Read_Strandness": "/projectnb/wax-es/zzhang/zz_G221/SAMPLES/G221_M76/Read_Strandness/G221_M76_Read_Strandness.txt", "G221_M71_Read_Strandness": "/projectnb/wax-es/zzhang/zz_G221/SAMPLES/G221_M71/Read_Strandness/G221_M71_Read_Strandness.txt", "G221_M69_Read_Strandness": "/projectnb/wax-es/zzhang/zz_G221/SAMPLES/G221_M69/Read_Strandness/G221_M69_Read_Strandness.txt", "G221_M79_Read_Strandness": "/projectnb/wax-es/zzhang/zz_G221/SAMPLES/G221_M79/Read_Strandness/G221_M79_Read_Strandness.txt", "G221_M77_Read_Strandness": "/projectnb/wax-es/zzhang/zz_G221/SAMPLES/G221_M77/Read_Strandness/G221_M77_Read_Strandness.txt", "G221_M74_Read_Strandness": "/projectnb/wax-es/zzhang/zz_G221/SAMPLES/G221_M74/Read_Strandness/G221_M74_Read_Strandness.txt", "G221_M72_Read_Strandness": "/projectnb/wax-es/zzhang/zz_G221/SAMPLES/G221_M72/Read_Strandness/G221_M72_Read_Strandness.txt", "G221_M80_Read_Strandness": "/projectnb/wax-es/zzhang/zz_G221/SAMPLES/G221_M80/Read_Strandness/G221_M80_Read_Strandness.txt" } }, "featureCounts": { "all_sections": { "G221_M78_sorted": "/projectnb/wax-es/zzhang/zz_G221/SAMPLES/G221_M78/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G221_M78_featureCounts.out.summary", "G221_M75_sorted": "/projectnb/wax-es/zzhang/zz_G221/SAMPLES/G221_M75/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G221_M75_featureCounts.out.summary", "G221_M73_sorted": 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"/projectnb/wax-es/zzhang/zz_G221/SAMPLES/G221_M77/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G221_M77_featureCounts.out.summary", "G221_M74_sorted": "/projectnb/wax-es/zzhang/zz_G221/SAMPLES/G221_M74/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G221_M74_featureCounts.out.summary", "G221_M72_sorted": "/projectnb/wax-es/zzhang/zz_G221/SAMPLES/G221_M72/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G221_M72_featureCounts.out.summary", "G221_M80_sorted": "/projectnb/wax-es/zzhang/zz_G221/SAMPLES/G221_M80/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G221_M80_featureCounts.out.summary" } }, "Samtools": { "flagstat": { "statistics_for_primary_unique_reads": "/projectnb/wax-es/zzhang/zz_G221/SAMPLES/G221_M80/aligner/statistics_for_primary_unique_reads.txt" } } }, "report_general_stats_data": [ { "G221_M78_sorted": { "Total": 7479314, "Assigned": 7053914, "Unassigned_Ambiguity": 0, "Unassigned_MultiMapping": 0, "Unassigned_NoFeatures": 425400, "Unassigned_Unmapped": 0, 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