Module	Section	Sample Name	Source
RSeQC	infer_experiment	G221_M73_Read_Strandness	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M73/Read_Strandness/G221_M73_Read_Strandness.txt
RSeQC	infer_experiment	G264_M02_Read_Strandness	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G264_M02/Read_Strandness/G264_M02_Read_Strandness.txt
RSeQC	infer_experiment	G221_M70_Read_Strandness	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M70/Read_Strandness/G221_M70_Read_Strandness.txt
RSeQC	infer_experiment	G264_M06_Read_Strandness	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G264_M06/Read_Strandness/G264_M06_Read_Strandness.txt
RSeQC	infer_experiment	G264_M03_Read_Strandness	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G264_M03/Read_Strandness/G264_M03_Read_Strandness.txt
RSeQC	infer_experiment	G221_M71_Read_Strandness	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M71/Read_Strandness/G221_M71_Read_Strandness.txt
RSeQC	infer_experiment	G264_M04_Read_Strandness	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G264_M04/Read_Strandness/G264_M04_Read_Strandness.txt
RSeQC	infer_experiment	G264_M01_Read_Strandness	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G264_M01/Read_Strandness/G264_M01_Read_Strandness.txt
RSeQC	infer_experiment	G221_M69_Read_Strandness	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M69/Read_Strandness/G221_M69_Read_Strandness.txt
RSeQC	infer_experiment	G264_M05_Read_Strandness	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G264_M05/Read_Strandness/G264_M05_Read_Strandness.txt
RSeQC	infer_experiment	G221_M74_Read_Strandness	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M74/Read_Strandness/G221_M74_Read_Strandness.txt
RSeQC	infer_experiment	G221_M72_Read_Strandness	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M72/Read_Strandness/G221_M72_Read_Strandness.txt
featureCounts	all_sections	G221_M73_sorted	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M73/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G221_M73_featureCounts.out.summary
featureCounts	all_sections	G264_M02_sorted	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G264_M02/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G264_M02_featureCounts.out.summary
featureCounts	all_sections	G221_M70_sorted	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M70/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G221_M70_featureCounts.out.summary
featureCounts	all_sections	G264_M06_sorted	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G264_M06/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G264_M06_featureCounts.out.summary
featureCounts	all_sections	G264_M03_sorted	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G264_M03/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G264_M03_featureCounts.out.summary
featureCounts	all_sections	G221_M71_sorted	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M71/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G221_M71_featureCounts.out.summary
featureCounts	all_sections	G264_M04_sorted	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G264_M04/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G264_M04_featureCounts.out.summary
featureCounts	all_sections	G264_M01_sorted	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G264_M01/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G264_M01_featureCounts.out.summary
featureCounts	all_sections	G221_M69_sorted	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M69/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G221_M69_featureCounts.out.summary
featureCounts	all_sections	G264_M05_sorted	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G264_M05/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G264_M05_featureCounts.out.summary
featureCounts	all_sections	G221_M74_sorted	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M74/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G221_M74_featureCounts.out.summary
featureCounts	all_sections	G221_M72_sorted	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M72/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G221_M72_featureCounts.out.summary
Samtools	flagstat	G221_M73_statistics_for_primary_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M73/aligner/G221_M73_statistics_for_primary_reads.txt
Samtools	flagstat	G221_M73_statistics_for_primary_unique_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M73/aligner/G221_M73_statistics_for_primary_unique_reads.txt
Samtools	flagstat	G221_M73_statistics_for_all_accepted_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M73/aligner/G221_M73_statistics_for_all_accepted_reads.txt
Samtools	flagstat	statistics_for_primary_unique_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G264_M05/aligner/statistics_for_primary_unique_reads.txt
Samtools	flagstat	G221_M70_statistics_for_primary_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M70/aligner/G221_M70_statistics_for_primary_reads.txt
Samtools	flagstat	G221_M70_statistics_for_all_accepted_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M70/aligner/G221_M70_statistics_for_all_accepted_reads.txt
Samtools	flagstat	G221_M70_statistics_for_primary_unique_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M70/aligner/G221_M70_statistics_for_primary_unique_reads.txt
Samtools	flagstat	G221_M71_statistics_for_primary_unique_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M71/aligner/G221_M71_statistics_for_primary_unique_reads.txt
Samtools	flagstat	G221_M71_statistics_for_all_accepted_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M71/aligner/G221_M71_statistics_for_all_accepted_reads.txt
Samtools	flagstat	G221_M71_statistics_for_primary_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M71/aligner/G221_M71_statistics_for_primary_reads.txt
Samtools	flagstat	G221_M69_statistics_for_primary_unique_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M69/aligner/G221_M69_statistics_for_primary_unique_reads.txt
Samtools	flagstat	G221_M69_statistics_for_all_accepted_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M69/aligner/G221_M69_statistics_for_all_accepted_reads.txt
Samtools	flagstat	G221_M69_statistics_for_primary_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M69/aligner/G221_M69_statistics_for_primary_reads.txt
Samtools	flagstat	G221_M74_statistics_for_primary_unique_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M74/aligner/G221_M74_statistics_for_primary_unique_reads.txt
Samtools	flagstat	G221_M74_statistics_for_primary_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M74/aligner/G221_M74_statistics_for_primary_reads.txt
Samtools	flagstat	G221_M74_statistics_for_all_accepted_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M74/aligner/G221_M74_statistics_for_all_accepted_reads.txt
Samtools	flagstat	G221_M72_statistics_for_all_accepted_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M72/aligner/G221_M72_statistics_for_all_accepted_reads.txt
Samtools	flagstat	G221_M72_statistics_for_primary_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M72/aligner/G221_M72_statistics_for_primary_reads.txt
Samtools	flagstat	G221_M72_statistics_for_primary_unique_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M72/aligner/G221_M72_statistics_for_primary_unique_reads.txt
STAR	SummaryLog	G221_M73_G221_M73	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M73/aligner/G221_M73_G221_M73_Log.final.out
STAR	SummaryLog	G221_M70_G221_M70	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M70/aligner/G221_M70_G221_M70_Log.final.out
STAR	SummaryLog	G221_M71_G221_M71	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M71/aligner/G221_M71_G221_M71_Log.final.out
STAR	SummaryLog	G221_M69_G221_M69	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M69/aligner/G221_M69_G221_M69_Log.final.out
STAR	SummaryLog	G221_M74_G221_M74	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M74/aligner/G221_M74_G221_M74_Log.final.out
STAR	SummaryLog	G221_M72_G221_M72	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M72/aligner/G221_M72_G221_M72_Log.final.out
STAR	ReadsPerGene	G221_M73	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M73/aligner/G221_M73_ReadsPerGene.out.tab
STAR	ReadsPerGene	G221_M70	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M70/aligner/G221_M70_ReadsPerGene.out.tab
STAR	ReadsPerGene	G221_M71	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M71/aligner/G221_M71_ReadsPerGene.out.tab
STAR	ReadsPerGene	G221_M69	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M69/aligner/G221_M69_ReadsPerGene.out.tab
STAR	ReadsPerGene	G221_M74	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M74/aligner/G221_M74_ReadsPerGene.out.tab
STAR	ReadsPerGene	G221_M72	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_vs_G221/SAMPLES/G221_M72/aligner/G221_M72_ReadsPerGene.out.tab