Module	Section	Sample Name	Source
RSeQC	infer_experiment	G264_M02_Read_Strandness	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M02/Read_Strandness/G264_M02_Read_Strandness.txt
RSeQC	infer_experiment	G264_M06_Read_Strandness	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M06/Read_Strandness/G264_M06_Read_Strandness.txt
RSeQC	infer_experiment	G264_M03_Read_Strandness	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M03/Read_Strandness/G264_M03_Read_Strandness.txt
RSeQC	infer_experiment	G264_M04_Read_Strandness	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M04/Read_Strandness/G264_M04_Read_Strandness.txt
RSeQC	infer_experiment	G264_M01_Read_Strandness	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M01/Read_Strandness/G264_M01_Read_Strandness.txt
RSeQC	infer_experiment	G264_M05_Read_Strandness	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M05/Read_Strandness/G264_M05_Read_Strandness.txt
featureCounts	all_sections	G264_M02_sorted	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M02/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G264_M02_featureCounts.out.summary
featureCounts	all_sections	G264_M06_sorted	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M06/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G264_M06_featureCounts.out.summary
featureCounts	all_sections	G264_M03_sorted	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M03/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G264_M03_featureCounts.out.summary
featureCounts	all_sections	G264_M04_sorted	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M04/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G264_M04_featureCounts.out.summary
featureCounts	all_sections	G264_M01_sorted	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M01/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G264_M01_featureCounts.out.summary
featureCounts	all_sections	G264_M05_sorted	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M05/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G264_M05_featureCounts.out.summary
Picard	InsertSizeMetrics	G264_M02_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M02/CollectInsertSizeMetrics/G264_M02_metrics
Picard	InsertSizeMetrics	G264_M06_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M06/CollectInsertSizeMetrics/G264_M06_metrics
Picard	InsertSizeMetrics	G264_M04_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M04/CollectInsertSizeMetrics/G264_M04_metrics
Picard	InsertSizeMetrics	G264_M01_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M01/CollectInsertSizeMetrics/G264_M01_metrics
Picard	InsertSizeMetrics	G264_M05_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M05/CollectInsertSizeMetrics/G264_M05_metrics
Picard	DuplicationMetrics	G264_M02_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M02/CollectDuplicates/G264_M02_marked_dup_metrics.txt
Picard	DuplicationMetrics	G264_M06_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M06/CollectDuplicates/G264_M06_marked_dup_metrics.txt
Picard	DuplicationMetrics	G264_M04_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M04/CollectDuplicates/G264_M04_marked_dup_metrics.txt
Picard	DuplicationMetrics	G264_M01_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M01/CollectDuplicates/G264_M01_marked_dup_metrics.txt
Picard	DuplicationMetrics	G264_M05_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M05/CollectDuplicates/G264_M05_marked_dup_metrics.txt
Picard	RnaSeqMetrics	G264_M02_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M02/CollectRnaSeqMetrics/G264_M02_metrics
Picard	RnaSeqMetrics	G264_M06_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M06/CollectRnaSeqMetrics/G264_M06_metrics
Picard	RnaSeqMetrics	G264_M04_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M04/CollectRnaSeqMetrics/G264_M04_metrics
Picard	RnaSeqMetrics	G264_M01_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M01/CollectRnaSeqMetrics/G264_M01_metrics
Picard	RnaSeqMetrics	G264_M05_primary_unique	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M05/CollectRnaSeqMetrics/G264_M05_metrics
Samtools	flagstat	G264_M02_statistics_for_primary_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M02/aligner/G264_M02_statistics_for_primary_reads.txt
Samtools	flagstat	statistics_for_primary_unique_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M05/aligner/statistics_for_primary_unique_reads.txt
Samtools	flagstat	G264_M02_statistics_for_primary_unique_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M02/aligner/G264_M02_statistics_for_primary_unique_reads.txt
Samtools	flagstat	G264_M02_statistics_for_all_accepted_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M02/aligner/G264_M02_statistics_for_all_accepted_reads.txt
Samtools	flagstat	G264_M06_statistics_for_all_accepted_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M06/aligner/G264_M06_statistics_for_all_accepted_reads.txt
Samtools	flagstat	G264_M06_statistics_for_primary_unique_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M06/aligner/G264_M06_statistics_for_primary_unique_reads.txt
Samtools	flagstat	G264_M06_statistics_for_primary_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M06/aligner/G264_M06_statistics_for_primary_reads.txt
Samtools	flagstat	G264_M03_statistics_for_primary_unique_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M03/aligner/G264_M03_statistics_for_primary_unique_reads.txt
Samtools	flagstat	G264_M03_statistics_for_all_accepted_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M03/aligner/G264_M03_statistics_for_all_accepted_reads.txt
Samtools	flagstat	G264_M03_statistics_for_primary_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M03/aligner/G264_M03_statistics_for_primary_reads.txt
Samtools	flagstat	G264_M04_statistics_for_all_accepted_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M04/aligner/G264_M04_statistics_for_all_accepted_reads.txt
Samtools	flagstat	G264_M04_statistics_for_primary_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M04/aligner/G264_M04_statistics_for_primary_reads.txt
Samtools	flagstat	G264_M04_statistics_for_primary_unique_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M04/aligner/G264_M04_statistics_for_primary_unique_reads.txt
Samtools	flagstat	G264_M01_statistics_for_primary_unique_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M01/aligner/G264_M01_statistics_for_primary_unique_reads.txt
Samtools	flagstat	G264_M01_statistics_for_all_accepted_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M01/aligner/G264_M01_statistics_for_all_accepted_reads.txt
Samtools	flagstat	G264_M01_statistics_for_primary_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M01/aligner/G264_M01_statistics_for_primary_reads.txt
Samtools	flagstat	G264_M05_statistics_for_primary_unique_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M05/aligner/G264_M05_statistics_for_primary_unique_reads.txt
Samtools	flagstat	G264_M05_statistics_for_primary_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M05/aligner/G264_M05_statistics_for_primary_reads.txt
Samtools	flagstat	G264_M05_statistics_for_all_accepted_reads	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M05/aligner/G264_M05_statistics_for_all_accepted_reads.txt
STAR	SummaryLog	G264_M02_G264_M02	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M02/aligner/G264_M02_G264_M02_Log.final.out
STAR	SummaryLog	G264_M06_G264_M06	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M06/aligner/G264_M06_G264_M06_Log.final.out
STAR	SummaryLog	G264_M03_G264_M03	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M03/aligner/G264_M03_G264_M03_Log.final.out
STAR	SummaryLog	G264_M04_G264_M04	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M04/aligner/G264_M04_G264_M04_Log.final.out
STAR	SummaryLog	G264_M01_G264_M01	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M01/aligner/G264_M01_G264_M01_Log.final.out
STAR	SummaryLog	G264_M05_G264_M05	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M05/aligner/G264_M05_G264_M05_Log.final.out
STAR	ReadsPerGene	G264_M02	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M02/aligner/G264_M02_ReadsPerGene.out.tab
STAR	ReadsPerGene	G264_M06	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M06/aligner/G264_M06_ReadsPerGene.out.tab
STAR	ReadsPerGene	G264_M03	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M03/aligner/G264_M03_ReadsPerGene.out.tab
STAR	ReadsPerGene	G264_M04	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M04/aligner/G264_M04_ReadsPerGene.out.tab
STAR	ReadsPerGene	G264_M01	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M01/aligner/G264_M01_ReadsPerGene.out.tab
STAR	ReadsPerGene	G264_M05	/projectnb/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/SAMPLES/G264_M05/aligner/G264_M05_ReadsPerGene.out.tab
fastp	all_sections	G264-M05-Fukai-s-sample_R1_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/Scripts/03_FASTQC/Job_Summary/G264_M05_FASTP/fastp.json
fastp	all_sections	G264-M06-Fukai-s-sample_R1_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/Scripts/03_FASTQC/Job_Summary/G264_M06_FASTP/fastp.json
fastp	all_sections	G264-M04-Fukai-s-sample_R1_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/Scripts/03_FASTQC/Job_Summary/G264_M04_FASTP/fastp.json
fastp	all_sections	G264-M01-Fukai-s-sample_R1_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/Scripts/03_FASTQC/Job_Summary/G264_M01_FASTP/fastp.json
fastp	all_sections	G264-M02-Fukai-s-sample_R1_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/Scripts/03_FASTQC/Job_Summary/G264_M02_FASTP/fastp.json
FastQC	all_sections	G264-M05-Fukai-s-sample_R2_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/Scripts/03_FASTQC/Job_Summary/G264_M05_FASTQC_R2/fastqc_data.txt
FastQC	all_sections	G264-M02-Fukai-s-sample_R1_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/Scripts/03_FASTQC/Job_Summary/G264_M02_FASTQC_R1/fastqc_data.txt
FastQC	all_sections	G264-M02-Fukai-s-sample_R2_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/Scripts/03_FASTQC/Job_Summary/G264_M02_FASTQC_R2/fastqc_data.txt
FastQC	all_sections	G264-M04-Fukai-s-sample_R2_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/Scripts/03_FASTQC/Job_Summary/G264_M04_FASTQC_R2/fastqc_data.txt
FastQC	all_sections	G264-M04-Fukai-s-sample_R1_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/Scripts/03_FASTQC/Job_Summary/G264_M04_FASTQC_R1/fastqc_data.txt
FastQC	all_sections	G264-M06-Fukai-s-sample_R2_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/Scripts/03_FASTQC/Job_Summary/G264_M06_FASTQC_R2/fastqc_data.txt
FastQC	all_sections	G264-M06-Fukai-s-sample_R1_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/Scripts/03_FASTQC/Job_Summary/G264_M06_FASTQC_R1/fastqc_data.txt
FastQC	all_sections	G264-M01-Fukai-s-sample_R1_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/Scripts/03_FASTQC/Job_Summary/G264_M01_FASTQC_R1/fastqc_data.txt
FastQC	all_sections	G264-M05-Fukai-s-sample_R1_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/Scripts/03_FASTQC/Job_Summary/G264_M05_FASTQC_R1/fastqc_data.txt
FastQC	all_sections	G264-M01-Fukai-s-sample_R2_001	/projectnb2/wax-dk/max/G260_G264_RNAseq/G264_RNAseq/Scripts/03_FASTQC/Job_Summary/G264_M01_FASTQC_R2/fastqc_data.txt